Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.77■■□□□ 1.08
PNMA1Q8ND90 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.77■■□□□ 1.08
PNMA1Q8ND90 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA1Q8ND90 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.77■■□□□ 1.08
PNMA1Q8ND90 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA1Q8ND90 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.77■■□□□ 1.08
PNMA1Q8ND90 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA1Q8ND90 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.77■■□□□ 1.08
PNMA1Q8ND90 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PNMA1Q8ND90 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.77■■□□□ 1.07
PNMA1Q8ND90 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 KRT8P7-201ENST00000533003 1432 ntBASIC21.76■■□□□ 1.07
PNMA1Q8ND90 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.76■■□□□ 1.07
PNMA1Q8ND90 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 MYC-208ENST00000641036 567 ntBASIC21.75■■□□□ 1.07
PNMA1Q8ND90 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.75■■□□□ 1.07
PNMA1Q8ND90 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 STARP1-201ENST00000397973 869 ntBASIC21.74■■□□□ 1.07
PNMA1Q8ND90 SPDYE15P-201ENST00000424157 909 ntBASIC21.74■■□□□ 1.07
PNMA1Q8ND90 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.74■■□□□ 1.07
PNMA1Q8ND90 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PNMA1Q8ND90 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 AP000974.1-201ENST00000623909 2387 ntBASIC21.73■■□□□ 1.07
PNMA1Q8ND90 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 AC104390.1-201ENST00000555663 520 ntBASIC21.73■■□□□ 1.07
PNMA1Q8ND90 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PNMA1Q8ND90 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.72■■□□□ 1.07
PNMA1Q8ND90 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms