Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 KRT18P23-201ENST00000435622 1283 ntBASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 AC104076.2-201ENST00000448912 469 ntBASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 AL023973.1-201ENST00000624619 620 ntBASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 YBX1P2-201ENST00000489612 999 ntBASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 KRT18P41-201ENST00000518924 1277 ntBASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAM1L1Q8N609 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 AK4P3-201ENST00000418260 669 ntBASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 AC011558.1-201ENST00000623459 338 ntBASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 CROCCP3-202ENST00000420820 1947 ntBASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAM1L1Q8N609 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 RNF152P1-201ENST00000397754 604 ntBASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 AL441883.1-201ENST00000566170 1045 ntBASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 AC024243.1-201ENST00000609234 778 ntBASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 AC098818.2-201ENST00000564925 2320 ntBASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 AC120498.9-201ENST00000339021 3867 ntBASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 AL031598.1-201ENST00000561511 1773 ntBASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAM1L1Q8N609 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms