Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 MTMR9LP-203ENST00000426597 1545 ntBASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 AC096733.2-201ENST00000609937 1394 ntBASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.53■□□□□ 0.56
CPNE9Q8IYJ1 KRT8P32-201ENST00000512863 1461 ntBASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 AC097488.1-201ENST00000507834 756 ntBASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE9Q8IYJ1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE9Q8IYJ1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.52■□□□□ 0.55
CPNE9Q8IYJ1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE9Q8IYJ1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.52■□□□□ 0.55
CPNE9Q8IYJ1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.52■□□□□ 0.55
CPNE9Q8IYJ1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.52■□□□□ 0.55
CPNE9Q8IYJ1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.52■□□□□ 0.55
CPNE9Q8IYJ1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE9Q8IYJ1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE9Q8IYJ1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE9Q8IYJ1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 AP003071.4-201ENST00000562276 1284 ntBASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 AC009113.1-201ENST00000570267 2443 ntBASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE9Q8IYJ1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 RCC2P3-201ENST00000418112 1537 ntBASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms