Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 TSPY14P-201ENST00000303979 915 ntBASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 CR769767.2-201ENST00000622735 460 ntBASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H3Q8IXZ2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 HOXB1-202ENST00000577092 1414 ntBASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 ABALON-201ENST00000629058 1903 ntBASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 MIR1238-201ENST00000408483 83 ntBASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 AC007663.1-201ENST00000438948 1240 ntBASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H3Q8IXZ2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 NOC2LP1-202ENST00000452600 2235 ntBASIC20.29■□□□□ 0.84
ZC3H3Q8IXZ2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 KRT8P9-201ENST00000558927 1449 ntBASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 AC010653.2-201ENST00000623505 997 ntBASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 AC093677.2-201ENST00000600169 1863 ntBASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ZC3H3Q8IXZ2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.27■□□□□ 0.84
ZC3H3Q8IXZ2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms