Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CDKL3Q8IVW4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 AC096733.2-201ENST00000609937 1394 ntBASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 AL357033.4-201ENST00000617703 1807 ntBASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 RPS2P55-201ENST00000397318 883 ntBASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 AC012618.2-201ENST00000428058 849 ntBASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 AC107956.1-201ENST00000494359 873 ntBASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 AC135050.7-201ENST00000624508 2218 ntBASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL3Q8IVW4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 ABHD17AP1-201ENST00000358206 933 ntBASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 AC116562.2-201ENST00000507042 360 ntBASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 AC112777.1-201ENST00000540175 1423 ntBASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL3Q8IVW4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 AC090340.1-201ENST00000620778 4980 ntBASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 SLC25A1P4-201ENST00000567977 778 ntBASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 AC233702.5-201ENST00000584107 538 ntBASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 AC113410.3-201ENST00000623366 203 ntBASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL3Q8IVW4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 KRT8P45-201ENST00000414328 1447 ntBASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 MFAP1P1-201ENST00000442257 1255 ntBASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 AL499627.1-201ENST00000569373 2188 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms