Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 AC011506.1-201ENST00000474329 610 ntBASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 AC142381.4-202ENST00000563973 229 ntBASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00346Q8IVM7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LINC00346Q8IVM7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LINC00346Q8IVM7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
LINC00346Q8IVM7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LINC00346Q8IVM7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LINC00346Q8IVM7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.58■□□□□ 0.25
LINC00346Q8IVM7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
LINC00346Q8IVM7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.58■□□□□ 0.25
LINC00346Q8IVM7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LINC00346Q8IVM7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.58■□□□□ 0.25
LINC00346Q8IVM7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LINC00346Q8IVM7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
LINC00346Q8IVM7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 FAM197Y1-201ENST00000421178 764 ntBASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 AL158047.1-201ENST00000445918 881 ntBASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 FAM207BP-201ENST00000447172 505 ntBASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 AC026271.3-201ENST00000571884 352 ntBASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 AL499627.1-201ENST00000569373 2188 ntBASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00346Q8IVM7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 MTMR9LP-203ENST00000426597 1545 ntBASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 AC098590.1-201ENST00000468126 897 ntBASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 B3GAT3P1-201ENST00000471720 806 ntBASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 MIR6786-201ENST00000616843 113 ntBASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LINC00346Q8IVM7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LINC00346Q8IVM7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms