Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
LYSMD2Q8IV50 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LYSMD2Q8IV50 AP001094.4-201ENST00000579008 2176 ntBASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 FEM1AP3-201ENST00000403722 1741 ntBASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 SDHAP1-207ENST00000440850 2000 ntBASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 AL513477.1-201ENST00000602865 2407 ntBASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 UBE2DNL-204ENST00000602536 740 ntBASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 AL596257.1-201ENST00000641463 2694 ntBASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD2Q8IV50 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 HLA-G-202ENST00000376815 851 ntBASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 HLA-G-203ENST00000376818 1127 ntBASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 TERF1P5-201ENST00000477545 1207 ntBASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD2Q8IV50 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 AC016405.3-201ENST00000607710 860 ntBASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD2Q8IV50 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms