Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MRPL55Q7Z7F7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 AL031598.1-201ENST00000561511 1773 ntBASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 KRASP1-201ENST00000407852 552 ntBASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 AL023875.1-201ENST00000640777 796 ntBASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MRPL55Q7Z7F7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 KRT16P5-201ENST00000455284 522 ntBASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 AC083906.6-201ENST00000641366 219 ntBASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 AL512353.2-201ENST00000448759 1962 ntBASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms