Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SHFQ7M4L6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHFQ7M4L6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHFQ7M4L6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHFQ7M4L6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHFQ7M4L6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHFQ7M4L6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHFQ7M4L6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHFQ7M4L6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHFQ7M4L6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHFQ7M4L6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHFQ7M4L6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHFQ7M4L6 AL499627.1-201ENST00000569373 2188 ntBASIC16.93■□□□□ 0.3
SHFQ7M4L6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHFQ7M4L6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHFQ7M4L6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHFQ7M4L6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.93■□□□□ 0.3
SHFQ7M4L6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHFQ7M4L6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHFQ7M4L6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHFQ7M4L6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHFQ7M4L6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 POM121L13P-201ENST00000422362 380 ntBASIC16.92■□□□□ 0.3
SHFQ7M4L6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHFQ7M4L6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHFQ7M4L6 AC142086.2-201ENST00000569753 217 ntBASIC16.92■□□□□ 0.3
SHFQ7M4L6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHFQ7M4L6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHFQ7M4L6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SHFQ7M4L6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHFQ7M4L6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHFQ7M4L6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHFQ7M4L6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHFQ7M4L6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
SHFQ7M4L6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SHFQ7M4L6 AC073592.3-201ENST00000625118 1834 ntBASIC16.91■□□□□ 0.3
SHFQ7M4L6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SHFQ7M4L6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.91■□□□□ 0.3
SHFQ7M4L6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.91■□□□□ 0.3
SHFQ7M4L6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SHFQ7M4L6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.91■□□□□ 0.3
SHFQ7M4L6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
SHFQ7M4L6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.91■□□□□ 0.3
SHFQ7M4L6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.91■□□□□ 0.3
SHFQ7M4L6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SHFQ7M4L6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.91■□□□□ 0.3
SHFQ7M4L6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.91■□□□□ 0.3
SHFQ7M4L6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms