Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 AL121772.3-201ENST00000610840 674 ntBASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC149Q6ZUS6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC149Q6ZUS6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC149Q6ZUS6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC149Q6ZUS6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC149Q6ZUS6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC149Q6ZUS6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 TSPY19P-201ENST00000418461 509 ntBASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 TSPY18P-201ENST00000441642 509 ntBASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 LINC00265-3P-201ENST00000447588 903 ntBASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 AP000867.3-201ENST00000524675 377 ntBASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 AL732292.2-201ENST00000609649 430 ntBASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 AC034236.2-201ENST00000606662 1610 ntBASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC149Q6ZUS6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 IRX1P1-201ENST00000438849 1838 ntBASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 DRAXINP1-201ENST00000437611 948 ntBASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 EMBP1-201ENST00000458200 901 ntBASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 AC009078.2-202ENST00000463353 338 ntBASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 AC091304.2-201ENST00000564639 760 ntBASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 MIR3180-4-201ENST00000582223 153 ntBASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 AL031008.1-201ENST00000619963 541 ntBASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC149Q6ZUS6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 TPSP2-201ENST00000561760 610 ntBASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 FP475955.4-201ENST00000623131 1990 ntBASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC149Q6ZUS6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC149Q6ZUS6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms