Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 AC005332.1-201ENST00000577698 1310 ntBASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 RASA4DP-201ENST00000460726 1199 ntBASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 SEC1P-202ENST00000473944 940 ntBASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 AC024243.1-201ENST00000609234 778 ntBASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 AC026471.1-201ENST00000564629 3026 ntBASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3CQ6NXT2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 AC112497.1-201ENST00000624824 639 ntBASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 LINC01311-201ENST00000565162 1445 ntBASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3CQ6NXT2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 HBZP1-201ENST00000354915 429 ntBASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 UPK3BP1-201ENST00000428678 509 ntBASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 HOXB1-202ENST00000577092 1414 ntBASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 AC008556.1-201ENST00000610908 2040 ntBASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 AFG3L1P-217ENST00000557444 2447 ntBASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 IER3-202ENST00000376377 1350 ntBASIC17.28■□□□□ 0.36
H3F3CQ6NXT2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
H3F3CQ6NXT2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms