Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC38Q5VT99 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC38Q5VT99 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.45■□□□□ 0.7
LRRC38Q5VT99 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC38Q5VT99 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 MIR564-202ENST00000385049 94 ntBASIC19.44■□□□□ 0.7
LRRC38Q5VT99 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 AL023284.2-201ENST00000405850 579 ntBASIC19.44■□□□□ 0.7
LRRC38Q5VT99 SLC25A1P4-201ENST00000567977 778 ntBASIC19.44■□□□□ 0.7
LRRC38Q5VT99 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 NOC2LP1-202ENST00000452600 2235 ntBASIC19.44■□□□□ 0.7
LRRC38Q5VT99 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 MYLKP1-201ENST00000509077 1580 ntBASIC19.44■□□□□ 0.7
LRRC38Q5VT99 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LRRC38Q5VT99 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 AL158047.1-201ENST00000445918 881 ntBASIC19.43■□□□□ 0.7
LRRC38Q5VT99 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 AC097488.1-201ENST00000507834 756 ntBASIC19.43■□□□□ 0.7
LRRC38Q5VT99 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC38Q5VT99 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 AP000593.1-201ENST00000393668 712 ntBASIC19.42■□□□□ 0.7
LRRC38Q5VT99 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 REXO1L10P-201ENST00000615707 1290 ntBASIC19.42■□□□□ 0.7
LRRC38Q5VT99 REXO1L12P-201ENST00000622156 912 ntBASIC19.42■□□□□ 0.7
LRRC38Q5VT99 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC38Q5VT99 AC007613.1-201ENST00000572811 2597 ntBASIC19.41■□□□□ 0.7
LRRC38Q5VT99 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 GPAT2P1-201ENST00000444924 1672 ntBASIC19.41■□□□□ 0.7
LRRC38Q5VT99 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 MCCD1P1-208ENST00000445732 328 ntBASIC19.41■□□□□ 0.7
LRRC38Q5VT99 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms