Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC007225.1-201ENST00000566331 1836 ntBASIC18.14■□□□□ 0.49
RIF1Q5UIP0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 OR7E14P-202ENST00000530490 1290 ntBASIC18.13■□□□□ 0.49
RIF1Q5UIP0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 PRSS29P-201ENST00000440800 595 ntBASIC18.13■□□□□ 0.49
RIF1Q5UIP0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 ALG1L5P-201ENST00000482043 771 ntBASIC18.13■□□□□ 0.49
RIF1Q5UIP0 GUSBP5-202ENST00000510805 1989 ntBASIC18.13■□□□□ 0.49
RIF1Q5UIP0 AL078644.1-201ENST00000609881 752 ntBASIC18.13■□□□□ 0.49
RIF1Q5UIP0 AC063926.2-201ENST00000623766 1308 ntBASIC18.13■□□□□ 0.49
RIF1Q5UIP0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RIF1Q5UIP0 AL162377.1-201ENST00000618844 1793 ntBASIC18.12■□□□□ 0.49
RIF1Q5UIP0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 AL049796.1-201ENST00000565336 1766 ntBASIC18.12■□□□□ 0.49
RIF1Q5UIP0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 AC105339.3-201ENST00000560043 636 ntBASIC18.12■□□□□ 0.49
RIF1Q5UIP0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RIF1Q5UIP0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 AC027612.4-201ENST00000605371 583 ntBASIC18.11■□□□□ 0.49
RIF1Q5UIP0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 FEM1AP4-201ENST00000443167 1987 ntBASIC18.11■□□□□ 0.49
RIF1Q5UIP0 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.11■□□□□ 0.49
RIF1Q5UIP0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 AC079834.2-201ENST00000609776 1949 ntBASIC18.11■□□□□ 0.49
RIF1Q5UIP0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 AC087641.1-201ENST00000557561 1021 ntBASIC18.11■□□□□ 0.49
RIF1Q5UIP0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RIF1Q5UIP0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIF1Q5UIP0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms