Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20■□□□□ 0.79
CTC1Q2NKJ3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CTC1Q2NKJ3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CTC1Q2NKJ3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CTC1Q2NKJ3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20■□□□□ 0.79
CTC1Q2NKJ3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CTC1Q2NKJ3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTC1Q2NKJ3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTC1Q2NKJ3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20■□□□□ 0.79
CTC1Q2NKJ3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20■□□□□ 0.79
CTC1Q2NKJ3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.99■□□□□ 0.79
CTC1Q2NKJ3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 MIR662-201ENST00000384847 95 ntBASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 KRT18P31-201ENST00000506277 1292 ntBASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTC1Q2NKJ3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 AL662844.1-201ENST00000546340 181 ntBASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 AC005332.7-201ENST00000614046 2005 ntBASIC19.97■□□□□ 0.79
CTC1Q2NKJ3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms