Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SYCNQ0VAF6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SYCNQ0VAF6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC12.4□□□□□ -0.43
SYCNQ0VAF6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SYCNQ0VAF6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
SYCNQ0VAF6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SYCNQ0VAF6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 RCC2P6-201ENST00000526625 1557 ntBASIC12.39□□□□□ -0.43
SYCNQ0VAF6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 KRT8P11-201ENST00000409686 1436 ntBASIC12.39□□□□□ -0.43
SYCNQ0VAF6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 AC011298.2-201ENST00000617989 482 ntBASIC12.39□□□□□ -0.43
SYCNQ0VAF6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 AL512353.2-201ENST00000448759 1962 ntBASIC12.39□□□□□ -0.43
SYCNQ0VAF6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SYCNQ0VAF6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 OR6D1P-203ENST00000641209 4860 ntBASIC12.38□□□□□ -0.43
SYCNQ0VAF6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 AC091390.4-202ENST00000476426 537 ntBASIC12.38□□□□□ -0.43
SYCNQ0VAF6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 AC142381.4-202ENST00000563973 229 ntBASIC12.38□□□□□ -0.43
SYCNQ0VAF6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SYCNQ0VAF6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms