Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
IRX3P78415 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.74■■□□□ 1.07
IRX3P78415 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.74■■□□□ 1.07
IRX3P78415 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
IRX3P78415 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
IRX3P78415 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX3P78415 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX3P78415 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.73■■□□□ 1.07
IRX3P78415 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.73■■□□□ 1.07
IRX3P78415 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.73■■□□□ 1.07
IRX3P78415 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX3P78415 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX3P78415 TSPY22P-201ENST00000427496 604 ntBASIC21.73■■□□□ 1.07
IRX3P78415 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
IRX3P78415 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.73■■□□□ 1.07
IRX3P78415 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.73■■□□□ 1.07
IRX3P78415 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
IRX3P78415 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
IRX3P78415 KRT18P1-202ENST00000452408 1331 ntBASIC21.73■■□□□ 1.07
IRX3P78415 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IRX3P78415 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
IRX3P78415 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.73■■□□□ 1.07
IRX3P78415 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX3P78415 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX3P78415 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.72■■□□□ 1.07
IRX3P78415 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX3P78415 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX3P78415 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX3P78415 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
IRX3P78415 AC087289.5-201ENST00000586076 3175 ntBASIC21.72■■□□□ 1.07
IRX3P78415 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX3P78415 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
IRX3P78415 MIR662-201ENST00000384847 95 ntBASIC21.72■■□□□ 1.07
IRX3P78415 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.72■■□□□ 1.07
IRX3P78415 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.72■■□□□ 1.07
IRX3P78415 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
IRX3P78415 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.72■■□□□ 1.07
IRX3P78415 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
IRX3P78415 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX3P78415 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.72■■□□□ 1.07
IRX3P78415 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX3P78415 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
IRX3P78415 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
IRX3P78415 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IRX3P78415 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IRX3P78415 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
IRX3P78415 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.71■■□□□ 1.07
IRX3P78415 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.71■■□□□ 1.07
IRX3P78415 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
IRX3P78415 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 NUS1P1-201ENST00000446295 882 ntBASIC21.71■■□□□ 1.07
IRX3P78415 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.71■■□□□ 1.07
IRX3P78415 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.71■■□□□ 1.07
IRX3P78415 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.71■■□□□ 1.07
IRX3P78415 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.71■■□□□ 1.07
IRX3P78415 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.71■■□□□ 1.07
IRX3P78415 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
IRX3P78415 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
IRX3P78415 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.7■■□□□ 1.07
IRX3P78415 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
IRX3P78415 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
IRX3P78415 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IRX3P78415 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
IRX3P78415 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.7■■□□□ 1.06
IRX3P78415 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
IRX3P78415 LINC01006-201ENST00000333319 2292 ntBASIC21.7■■□□□ 1.06
IRX3P78415 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IRX3P78415 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
IRX3P78415 KRT18P23-201ENST00000435622 1283 ntBASIC21.7■■□□□ 1.06
IRX3P78415 FAAHP1-202ENST00000446499 1238 ntBASIC21.7■■□□□ 1.06
IRX3P78415 UNC93B7-201ENST00000509439 705 ntBASIC21.7■■□□□ 1.06
IRX3P78415 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.7■■□□□ 1.06
IRX3P78415 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.7■■□□□ 1.06
IRX3P78415 Z82202.1-201ENST00000623446 1880 ntBASIC21.7■■□□□ 1.06
IRX3P78415 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.7■■□□□ 1.06
IRX3P78415 AC112907.3-201ENST00000577781 2400 ntBASIC21.7■■□□□ 1.06
IRX3P78415 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.7■■□□□ 1.06
IRX3P78415 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IRX3P78415 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
IRX3P78415 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
IRX3P78415 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
IRX3P78415 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
IRX3P78415 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
IRX3P78415 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.7■■□□□ 1.06
IRX3P78415 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
IRX3P78415 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms