Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH11P55287 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH11P55287 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH11P55287 TSPY7P-201ENST00000431358 1114 ntBASIC17.16■□□□□ 0.34
CDH11P55287 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.16■□□□□ 0.34
CDH11P55287 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDH11P55287 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH11P55287 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH11P55287 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH11P55287 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDH11P55287 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDH11P55287 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH11P55287 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH11P55287 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDH11P55287 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDH11P55287 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.15■□□□□ 0.34
CDH11P55287 AC083906.6-201ENST00000641366 219 ntBASIC17.15■□□□□ 0.34
CDH11P55287 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH11P55287 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH11P55287 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH11P55287 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CDH11P55287 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH11P55287 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDH11P55287 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH11P55287 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH11P55287 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.14■□□□□ 0.34
CDH11P55287 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CDH11P55287 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.14■□□□□ 0.34
CDH11P55287 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.14■□□□□ 0.34
CDH11P55287 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH11P55287 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH11P55287 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH11P55287 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH11P55287 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDH11P55287 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH11P55287 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CDH11P55287 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH11P55287 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH11P55287 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDH11P55287 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH11P55287 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH11P55287 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.14■□□□□ 0.33
CDH11P55287 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDH11P55287 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH11P55287 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH11P55287 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH11P55287 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH11P55287 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH11P55287 MIR4785-201ENST00000585005 73 ntBASIC17.14■□□□□ 0.33
CDH11P55287 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
CDH11P55287 KRT17P2-201ENST00000300992 1314 ntBASIC17.14■□□□□ 0.33
CDH11P55287 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH11P55287 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH11P55287 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH11P55287 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH11P55287 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH11P55287 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH11P55287 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH11P55287 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH11P55287 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH11P55287 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH11P55287 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH11P55287 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH11P55287 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms