Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.83■□□□□ 0.77
CACNA2D1P54289 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA2D1P54289 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA2D1P54289 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.83■□□□□ 0.77
CACNA2D1P54289 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.83■□□□□ 0.77
CACNA2D1P54289 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA2D1P54289 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA2D1P54289 RNF152P1-201ENST00000397754 604 ntBASIC19.83■□□□□ 0.77
CACNA2D1P54289 TSPY5P-201ENST00000426936 936 ntBASIC19.83■□□□□ 0.77
CACNA2D1P54289 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA2D1P54289 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.83■□□□□ 0.77
CACNA2D1P54289 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.83■□□□□ 0.77
CACNA2D1P54289 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.83■□□□□ 0.77
CACNA2D1P54289 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA2D1P54289 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA2D1P54289 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.83■□□□□ 0.77
CACNA2D1P54289 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.83■□□□□ 0.77
CACNA2D1P54289 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.83■□□□□ 0.77
CACNA2D1P54289 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.83■□□□□ 0.77
CACNA2D1P54289 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA2D1P54289 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA2D1P54289 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA2D1P54289 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA2D1P54289 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA2D1P54289 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CACNA2D1P54289 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA2D1P54289 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA2D1P54289 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CACNA2D1P54289 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA2D1P54289 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.83■□□□□ 0.76
CACNA2D1P54289 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CACNA2D1P54289 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.82■□□□□ 0.76
CACNA2D1P54289 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.82■□□□□ 0.76
CACNA2D1P54289 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CACNA2D1P54289 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.82■□□□□ 0.76
CACNA2D1P54289 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.82■□□□□ 0.76
CACNA2D1P54289 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.82■□□□□ 0.76
CACNA2D1P54289 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.82■□□□□ 0.76
CACNA2D1P54289 GCSHP2-201ENST00000560971 527 ntBASIC19.82■□□□□ 0.76
CACNA2D1P54289 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.82■□□□□ 0.76
CACNA2D1P54289 MIR3180-5-201ENST00000583743 153 ntBASIC19.82■□□□□ 0.76
CACNA2D1P54289 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.82■□□□□ 0.76
CACNA2D1P54289 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.82■□□□□ 0.76
CACNA2D1P54289 AL590326.2-201ENST00000625139 305 ntBASIC19.82■□□□□ 0.76
CACNA2D1P54289 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.82■□□□□ 0.76
CACNA2D1P54289 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA2D1P54289 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 KRT18P38-201ENST00000449496 1282 ntBASIC19.81■□□□□ 0.76
CACNA2D1P54289 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 AL109659.2-201ENST00000606809 1674 ntBASIC19.81■□□□□ 0.76
CACNA2D1P54289 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CACNA2D1P54289 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA2D1P54289 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.8■□□□□ 0.76
CACNA2D1P54289 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA2D1P54289 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CACNA2D1P54289 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms