Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LIMK2P53671 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.88■□□□□ 0.61
LIMK2P53671 Z85996.1-201ENST00000494644 937 ntBASIC18.88■□□□□ 0.61
LIMK2P53671 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LIMK2P53671 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.88■□□□□ 0.61
LIMK2P53671 NAPSB-206ENST00000562112 1266 ntBASIC18.88■□□□□ 0.61
LIMK2P53671 AC026271.3-201ENST00000571884 352 ntBASIC18.88■□□□□ 0.61
LIMK2P53671 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.88■□□□□ 0.61
LIMK2P53671 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.88■□□□□ 0.61
LIMK2P53671 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.88■□□□□ 0.61
LIMK2P53671 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
LIMK2P53671 AL354751.1-201ENST00000412768 1863 ntBASIC18.88■□□□□ 0.61
LIMK2P53671 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LIMK2P53671 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
LIMK2P53671 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LIMK2P53671 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LIMK2P53671 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LIMK2P53671 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LIMK2P53671 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LIMK2P53671 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.87■□□□□ 0.61
LIMK2P53671 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LIMK2P53671 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LIMK2P53671 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LIMK2P53671 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LIMK2P53671 TMPOP1-202ENST00000424642 1267 ntBASIC18.87■□□□□ 0.61
LIMK2P53671 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.87■□□□□ 0.61
LIMK2P53671 AL390955.1-201ENST00000428694 934 ntBASIC18.87■□□□□ 0.61
LIMK2P53671 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LIMK2P53671 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.87■□□□□ 0.61
LIMK2P53671 FSCN1P1-201ENST00000568912 1481 ntBASIC18.87■□□□□ 0.61
LIMK2P53671 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
LIMK2P53671 AC005363.2-201ENST00000618631 242 ntBASIC18.87■□□□□ 0.61
LIMK2P53671 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LIMK2P53671 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LIMK2P53671 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LIMK2P53671 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
LIMK2P53671 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LIMK2P53671 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.86■□□□□ 0.61
LIMK2P53671 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LIMK2P53671 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.86■□□□□ 0.61
LIMK2P53671 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LIMK2P53671 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.86■□□□□ 0.61
LIMK2P53671 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LIMK2P53671 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.86■□□□□ 0.61
LIMK2P53671 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LIMK2P53671 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 LINC01568-207ENST00000641790 1380 ntBASIC18.86■□□□□ 0.61
LIMK2P53671 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LIMK2P53671 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.86■□□□□ 0.61
LIMK2P53671 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LIMK2P53671 RN7SL850P-201ENST00000579959 291 ntBASIC18.86■□□□□ 0.61
LIMK2P53671 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.86■□□□□ 0.61
LIMK2P53671 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.86■□□□□ 0.61
LIMK2P53671 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.86■□□□□ 0.61
LIMK2P53671 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.86■□□□□ 0.61
LIMK2P53671 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
LIMK2P53671 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LIMK2P53671 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIMK2P53671 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.86■□□□□ 0.61
LIMK2P53671 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LIMK2P53671 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 CYP2D8P-201ENST00000433633 1490 ntBASIC18.85■□□□□ 0.61
LIMK2P53671 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.85■□□□□ 0.61
LIMK2P53671 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LIMK2P53671 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms