Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGA2P52926 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
HMGA2P52926 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HMGA2P52926 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
HMGA2P52926 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HMGA2P52926 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HMGA2P52926 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGA2P52926 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGA2P52926 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGA2P52926 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGA2P52926 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGA2P52926 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGA2P52926 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGA2P52926 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGA2P52926 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGA2P52926 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.1■□□□□ 0.33
HMGA2P52926 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGA2P52926 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGA2P52926 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGA2P52926 KRT16P5-201ENST00000455284 522 ntBASIC17.1■□□□□ 0.33
HMGA2P52926 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGA2P52926 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.1■□□□□ 0.33
HMGA2P52926 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGA2P52926 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGA2P52926 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGA2P52926 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGA2P52926 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGA2P52926 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HMGA2P52926 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGA2P52926 MYLKP1-201ENST00000509077 1580 ntBASIC17.1■□□□□ 0.33
HMGA2P52926 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HMGA2P52926 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGA2P52926 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGA2P52926 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGA2P52926 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HMGA2P52926 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGA2P52926 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGA2P52926 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HMGA2P52926 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGA2P52926 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HMGA2P52926 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HMGA2P52926 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HMGA2P52926 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGA2P52926 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 HTR7P1-201ENST00000538670 1336 ntBASIC17.09■□□□□ 0.33
HMGA2P52926 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGA2P52926 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGA2P52926 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGA2P52926 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HMGA2P52926 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
HMGA2P52926 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
HMGA2P52926 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HMGA2P52926 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGA2P52926 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HMGA2P52926 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HMGA2P52926 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HMGA2P52926 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGA2P52926 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
HMGA2P52926 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGA2P52926 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGA2P52926 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGA2P52926 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.08■□□□□ 0.33
HMGA2P52926 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HMGA2P52926 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.08■□□□□ 0.33
HMGA2P52926 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGA2P52926 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGA2P52926 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMGA2P52926 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HMGA2P52926 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HMGA2P52926 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGA2P52926 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGA2P52926 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.08■□□□□ 0.32
HMGA2P52926 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGA2P52926 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
HMGA2P52926 AC131212.4-201ENST00000623606 975 ntBASIC17.08■□□□□ 0.32
HMGA2P52926 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HMGA2P52926 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGA2P52926 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGA2P52926 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGA2P52926 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGA2P52926 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms