Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GPC3P51654 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC3P51654 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC3P51654 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC3P51654 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC3P51654 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.66■□□□□ 0.9
GPC3P51654 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.66■□□□□ 0.9
GPC3P51654 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC3P51654 AC098818.2-201ENST00000564925 2320 ntBASIC20.66■□□□□ 0.9
GPC3P51654 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC3P51654 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
GPC3P51654 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
GPC3P51654 AC008556.1-201ENST00000610908 2040 ntBASIC20.65■□□□□ 0.9
GPC3P51654 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.65■□□□□ 0.9
GPC3P51654 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.65■□□□□ 0.9
GPC3P51654 LINC01311-201ENST00000565162 1445 ntBASIC20.65■□□□□ 0.9
GPC3P51654 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
GPC3P51654 IER3-202ENST00000376377 1350 ntBASIC20.65■□□□□ 0.9
GPC3P51654 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
GPC3P51654 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
GPC3P51654 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 RASA4DP-201ENST00000460726 1199 ntBASIC20.65■□□□□ 0.9
GPC3P51654 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GPC3P51654 ZNF444P1-201ENST00000559497 298 ntBASIC20.65■□□□□ 0.9
GPC3P51654 AL136038.3-201ENST00000561909 1096 ntBASIC20.65■□□□□ 0.9
GPC3P51654 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GPC3P51654 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
GPC3P51654 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
GPC3P51654 AC116407.4-201ENST00000623319 1061 ntBASIC20.65■□□□□ 0.9
GPC3P51654 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GPC3P51654 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
GPC3P51654 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
GPC3P51654 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GPC3P51654 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GPC3P51654 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC3P51654 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.65■□□□□ 0.9
GPC3P51654 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.64■□□□□ 0.9
GPC3P51654 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.64■□□□□ 0.9
GPC3P51654 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GPC3P51654 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GPC3P51654 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
GPC3P51654 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
GPC3P51654 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GPC3P51654 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC3P51654 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.64■□□□□ 0.89
GPC3P51654 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
GPC3P51654 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.64■□□□□ 0.89
GPC3P51654 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC3P51654 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC3P51654 SEC1P-202ENST00000473944 940 ntBASIC20.64■□□□□ 0.89
GPC3P51654 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.64■□□□□ 0.89
GPC3P51654 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.64■□□□□ 0.89
GPC3P51654 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.64■□□□□ 0.89
GPC3P51654 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.64■□□□□ 0.89
GPC3P51654 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.64■□□□□ 0.89
GPC3P51654 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC3P51654 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GPC3P51654 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC3P51654 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
GPC3P51654 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC3P51654 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC3P51654 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.64■□□□□ 0.89
GPC3P51654 AL049812.1-201ENST00000432563 2267 ntBASIC20.64■□□□□ 0.89
GPC3P51654 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.64■□□□□ 0.89
GPC3P51654 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC3P51654 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.63■□□□□ 0.89
GPC3P51654 KRT8P32-201ENST00000512863 1461 ntBASIC20.63■□□□□ 0.89
GPC3P51654 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC3P51654 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.63■□□□□ 0.89
GPC3P51654 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC3P51654 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPC3P51654 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPC3P51654 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC3P51654 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPC3P51654 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.63■□□□□ 0.89
GPC3P51654 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.63■□□□□ 0.89
GPC3P51654 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPC3P51654 AC034232.1-201ENST00000506026 1064 ntBASIC20.63■□□□□ 0.89
GPC3P51654 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GPC3P51654 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.63■□□□□ 0.89
GPC3P51654 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC3P51654 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.63■□□□□ 0.89
GPC3P51654 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
GPC3P51654 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC3P51654 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms