Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.73■□□□□ 0.91
CPT1AP50416 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.73■□□□□ 0.91
CPT1AP50416 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPT1AP50416 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPT1AP50416 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
CPT1AP50416 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPT1AP50416 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPT1AP50416 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CPT1AP50416 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPT1AP50416 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.72■□□□□ 0.91
CPT1AP50416 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPT1AP50416 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.72■□□□□ 0.91
CPT1AP50416 AC074051.2-201ENST00000565115 352 ntBASIC20.72■□□□□ 0.91
CPT1AP50416 AC068587.9-201ENST00000641814 219 ntBASIC20.72■□□□□ 0.91
CPT1AP50416 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPT1AP50416 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPT1AP50416 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
CPT1AP50416 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.72■□□□□ 0.91
CPT1AP50416 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPT1AP50416 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CPT1AP50416 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.71■□□□□ 0.91
CPT1AP50416 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.71■□□□□ 0.91
CPT1AP50416 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 GUSBP12-201ENST00000513727 720 ntBASIC20.71■□□□□ 0.91
CPT1AP50416 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.71■□□□□ 0.91
CPT1AP50416 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.71■□□□□ 0.91
CPT1AP50416 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.71■□□□□ 0.91
CPT1AP50416 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
CPT1AP50416 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.71■□□□□ 0.91
CPT1AP50416 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPT1AP50416 AC233702.3-201ENST00000578656 1387 ntBASIC20.71■□□□□ 0.91
CPT1AP50416 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.71■□□□□ 0.91
CPT1AP50416 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.71■□□□□ 0.91
CPT1AP50416 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPT1AP50416 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CPT1AP50416 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPT1AP50416 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPT1AP50416 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CPT1AP50416 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CPT1AP50416 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPT1AP50416 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.7■□□□□ 0.9
CPT1AP50416 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CPT1AP50416 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPT1AP50416 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPT1AP50416 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.7■□□□□ 0.9
CPT1AP50416 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CPT1AP50416 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
CPT1AP50416 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPT1AP50416 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.7■□□□□ 0.9
CPT1AP50416 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPT1AP50416 AL031008.1-201ENST00000619963 541 ntBASIC20.7■□□□□ 0.9
CPT1AP50416 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPT1AP50416 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.7■□□□□ 0.9
CPT1AP50416 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPT1AP50416 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPT1AP50416 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CPT1AP50416 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPT1AP50416 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.7■□□□□ 0.9
CPT1AP50416 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPT1AP50416 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPT1AP50416 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.69■□□□□ 0.9
CPT1AP50416 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPT1AP50416 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPT1AP50416 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPT1AP50416 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPT1AP50416 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.69■□□□□ 0.9
CPT1AP50416 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.69■□□□□ 0.9
CPT1AP50416 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.69■□□□□ 0.9
CPT1AP50416 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.69■□□□□ 0.9
CPT1AP50416 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.69■□□□□ 0.9
CPT1AP50416 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.69■□□□□ 0.9
CPT1AP50416 AC138894.3-201ENST00000603787 634 ntBASIC20.69■□□□□ 0.9
CPT1AP50416 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.69■□□□□ 0.9
CPT1AP50416 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.69■□□□□ 0.9
CPT1AP50416 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
CPT1AP50416 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CPT1AP50416 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.69■□□□□ 0.9
CPT1AP50416 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPT1AP50416 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPT1AP50416 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPT1AP50416 LINC00167-201ENST00000530583 1419 ntBASIC20.69■□□□□ 0.9
CPT1AP50416 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CPT1AP50416 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPT1AP50416 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.68■□□□□ 0.9
CPT1AP50416 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPT1AP50416 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
CPT1AP50416 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms