Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.79□□□□□ -0.2
CKS2P33552 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CKS2P33552 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.79□□□□□ -0.2
CKS2P33552 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CKS2P33552 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CKS2P33552 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CKS2P33552 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CKS2P33552 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.78□□□□□ -0.2
CKS2P33552 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CKS2P33552 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.78□□□□□ -0.2
CKS2P33552 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.78□□□□□ -0.2
CKS2P33552 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CKS2P33552 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.78□□□□□ -0.2
CKS2P33552 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.78□□□□□ -0.2
CKS2P33552 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CKS2P33552 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CKS2P33552 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CKS2P33552 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CKS2P33552 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CKS2P33552 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CKS2P33552 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CKS2P33552 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CKS2P33552 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CKS2P33552 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.77□□□□□ -0.21
CKS2P33552 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.77□□□□□ -0.21
CKS2P33552 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CKS2P33552 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.77□□□□□ -0.21
CKS2P33552 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CKS2P33552 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.77□□□□□ -0.21
CKS2P33552 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.77□□□□□ -0.21
CKS2P33552 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.77□□□□□ -0.21
CKS2P33552 C2orf69P4-201ENST00000565394 541 ntBASIC13.77□□□□□ -0.21
CKS2P33552 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.77□□□□□ -0.21
CKS2P33552 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CKS2P33552 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CKS2P33552 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CKS2P33552 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.76□□□□□ -0.21
CKS2P33552 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.76□□□□□ -0.21
CKS2P33552 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CKS2P33552 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CKS2P33552 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.76□□□□□ -0.21
CKS2P33552 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CKS2P33552 AC123595.1-201ENST00000440769 1046 ntBASIC13.76□□□□□ -0.21
CKS2P33552 RARRES2P4-201ENST00000514074 484 ntBASIC13.76□□□□□ -0.21
CKS2P33552 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CKS2P33552 AL031432.3-201ENST00000607698 485 ntBASIC13.76□□□□□ -0.21
CKS2P33552 AC013268.1-206ENST00000638368 961 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms