Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
CPS1P31327 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPS1P31327 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPS1P31327 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CPS1P31327 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPS1P31327 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC26.41■■□□□ 1.82
CPS1P31327 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPS1P31327 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC26.41■■□□□ 1.82
CPS1P31327 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC26.41■■□□□ 1.82
CPS1P31327 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC26.41■■□□□ 1.82
CPS1P31327 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC26.4■■□□□ 1.82
CPS1P31327 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CPS1P31327 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC26.4■■□□□ 1.82
CPS1P31327 ENSA-205ENST00000361532 792 ntTSL 2 BASIC26.4■■□□□ 1.82
CPS1P31327 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CPS1P31327 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CPS1P31327 AL035633.1-201ENST00000406139 838 ntBASIC26.4■■□□□ 1.82
CPS1P31327 METTL21AP1-201ENST00000438852 635 ntBASIC26.4■■□□□ 1.82
CPS1P31327 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC26.4■■□□□ 1.82
CPS1P31327 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CPS1P31327 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC26.4■■□□□ 1.82
CPS1P31327 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CPS1P31327 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CPS1P31327 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CPS1P31327 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC26.4■■□□□ 1.82
CPS1P31327 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CPS1P31327 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CPS1P31327 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CPS1P31327 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CPS1P31327 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
CPS1P31327 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CPS1P31327 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC26.39■■□□□ 1.82
CPS1P31327 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.82
CPS1P31327 AC004832.2-201ENST00000426397 482 ntBASIC26.39■■□□□ 1.82
CPS1P31327 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC26.39■■□□□ 1.82
CPS1P31327 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC26.39■■□□□ 1.82
CPS1P31327 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CPS1P31327 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CPS1P31327 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CPS1P31327 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
CPS1P31327 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CPS1P31327 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
CPS1P31327 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CPS1P31327 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC26.39■■□□□ 1.81
CPS1P31327 COA5-202ENST00000409997 557 ntTSL 4 BASIC26.39■■□□□ 1.81
CPS1P31327 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CPS1P31327 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CPS1P31327 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
CPS1P31327 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CPS1P31327 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CPS1P31327 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CPS1P31327 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC26.38■■□□□ 1.81
CPS1P31327 CALY-203ENST00000368558 825 ntTSL 5 BASIC26.38■■□□□ 1.81
CPS1P31327 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC26.38■■□□□ 1.81
CPS1P31327 AC104390.1-201ENST00000555663 520 ntBASIC26.38■■□□□ 1.81
CPS1P31327 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CPS1P31327 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC26.37■■□□□ 1.81
CPS1P31327 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC26.37■■□□□ 1.81
CPS1P31327 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CPS1P31327 TEX21P-204ENST00000641479 1693 ntBASIC26.37■■□□□ 1.81
CPS1P31327 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CPS1P31327 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC26.37■■□□□ 1.81
CPS1P31327 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CPS1P31327 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CPS1P31327 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC26.37■■□□□ 1.81
CPS1P31327 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
CPS1P31327 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CPS1P31327 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC26.37■■□□□ 1.81
CPS1P31327 RBM17P3-201ENST00000417687 1192 ntBASIC26.37■■□□□ 1.81
CPS1P31327 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CPS1P31327 AC096582.2-201ENST00000510860 516 ntBASIC26.37■■□□□ 1.81
CPS1P31327 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC26.37■■□□□ 1.81
CPS1P31327 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC26.37■■□□□ 1.81
CPS1P31327 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC26.37■■□□□ 1.81
CPS1P31327 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CPS1P31327 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CPS1P31327 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CPS1P31327 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
CPS1P31327 TP73-202ENST00000354437 2140 ntTSL 5 BASIC26.37■■□□□ 1.81
CPS1P31327 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CPS1P31327 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC26.36■■□□□ 1.81
CPS1P31327 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CPS1P31327 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CPS1P31327 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CPS1P31327 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CPS1P31327 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
CPS1P31327 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC26.36■■□□□ 1.81
CPS1P31327 Z83851.2-201ENST00000609564 659 ntBASIC26.36■■□□□ 1.81
CPS1P31327 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CPS1P31327 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
CPS1P31327 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CPS1P31327 MED17-221ENST00000639724 2317 ntTSL 5 BASIC26.36■■□□□ 1.81
CPS1P31327 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CPS1P31327 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CPS1P31327 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CPS1P31327 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CPS1P31327 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.36■■□□□ 1.81
CPS1P31327 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC26.35■■□□□ 1.81
CPS1P31327 KRT8P7-201ENST00000533003 1432 ntBASIC26.35■■□□□ 1.81
CPS1P31327 AL109659.2-201ENST00000606809 1674 ntBASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms