Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ABCD1P5-201ENST00000445663 754 ntBASIC24.49■■□□□ 1.51
RXRBP28702 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC24.49■■□□□ 1.51
RXRBP28702 REEP1-209ENST00000541910 969 ntTSL 2 BASIC24.49■■□□□ 1.51
RXRBP28702 INO80C-206ENST00000586489 594 ntTSL 3 BASIC24.49■■□□□ 1.51
RXRBP28702 AC027612.4-201ENST00000605371 583 ntBASIC24.49■■□□□ 1.51
RXRBP28702 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC24.49■■□□□ 1.51
RXRBP28702 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
RXRBP28702 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC24.49■■□□□ 1.51
RXRBP28702 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC24.49■■□□□ 1.51
RXRBP28702 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RXRBP28702 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.48■■□□□ 1.51
RXRBP28702 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RXRBP28702 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RXRBP28702 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RXRBP28702 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RXRBP28702 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC24.48■■□□□ 1.51
RXRBP28702 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RXRBP28702 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC24.48■■□□□ 1.51
RXRBP28702 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
RXRBP28702 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC24.48■■□□□ 1.51
RXRBP28702 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RXRBP28702 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
RXRBP28702 AC002310.6-201ENST00000624451 1377 ntBASIC24.48■■□□□ 1.51
RXRBP28702 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RXRBP28702 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
RXRBP28702 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RXRBP28702 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RXRBP28702 AC008556.1-201ENST00000610908 2040 ntBASIC24.47■■□□□ 1.51
RXRBP28702 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RXRBP28702 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RXRBP28702 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.47■■□□□ 1.51
RXRBP28702 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RXRBP28702 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RXRBP28702 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RXRBP28702 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC24.47■■□□□ 1.51
RXRBP28702 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC24.47■■□□□ 1.51
RXRBP28702 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.47■■□□□ 1.51
RXRBP28702 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RXRBP28702 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.47■■□□□ 1.51
RXRBP28702 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RXRBP28702 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RXRBP28702 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RXRBP28702 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RXRBP28702 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.46■■□□□ 1.51
RXRBP28702 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RXRBP28702 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC24.46■■□□□ 1.51
RXRBP28702 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RXRBP28702 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
RXRBP28702 CD82-202ENST00000342935 967 ntTSL 5 BASIC24.46■■□□□ 1.51
RXRBP28702 FUOM-202ENST00000368551 628 ntTSL 3 BASIC24.46■■□□□ 1.51
RXRBP28702 ELP6-205ENST00000439305 880 ntTSL 2 BASIC24.46■■□□□ 1.51
RXRBP28702 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC24.46■■□□□ 1.51
RXRBP28702 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC24.46■■□□□ 1.51
RXRBP28702 DUX4L17-201ENST00000557360 1267 ntBASIC24.46■■□□□ 1.51
RXRBP28702 MTDHP4-201ENST00000600287 670 ntBASIC24.46■■□□□ 1.51
RXRBP28702 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC24.46■■□□□ 1.51
RXRBP28702 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RXRBP28702 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RXRBP28702 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
RXRBP28702 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RXRBP28702 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RXRBP28702 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.45■■□□□ 1.5
RXRBP28702 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RXRBP28702 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RXRBP28702 TSEN15P1-201ENST00000423257 515 ntBASIC24.45■■□□□ 1.5
RXRBP28702 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
RXRBP28702 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC24.45■■□□□ 1.5
RXRBP28702 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
RXRBP28702 AL139288.1-201ENST00000623748 933 ntBASIC24.45■■□□□ 1.5
RXRBP28702 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
RXRBP28702 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC24.45■■□□□ 1.5
RXRBP28702 ELL2P1-201ENST00000413990 1906 ntBASIC24.45■■□□□ 1.5
RXRBP28702 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RXRBP28702 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RXRBP28702 GOLGA6L5P-202ENST00000515341 1828 ntBASIC24.45■■□□□ 1.5
RXRBP28702 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC24.44■■□□□ 1.5
RXRBP28702 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RXRBP28702 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
RXRBP28702 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RXRBP28702 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC24.44■■□□□ 1.5
RXRBP28702 MKNK2P1-201ENST00000437526 628 ntBASIC24.44■■□□□ 1.5
RXRBP28702 CEND1P1-201ENST00000451006 455 ntBASIC24.44■■□□□ 1.5
RXRBP28702 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RXRBP28702 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC24.44■■□□□ 1.5
RXRBP28702 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RXRBP28702 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
RXRBP28702 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
RXRBP28702 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.44■■□□□ 1.5
RXRBP28702 GAS2L1P1-201ENST00000420145 1480 ntBASIC24.44■■□□□ 1.5
RXRBP28702 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RXRBP28702 AC006128.1-201ENST00000624704 1661 ntBASIC24.43■■□□□ 1.5
RXRBP28702 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC24.43■■□□□ 1.5
RXRBP28702 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RXRBP28702 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
RXRBP28702 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
RXRBP28702 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RXRBP28702 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RXRBP28702 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RXRBP28702 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC24.43■■□□□ 1.5
RXRBP28702 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms