Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN1P18031 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN1P18031 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PTPN1P18031 AC006333.2-201ENST00000607957 2099 ntBASIC19.82■□□□□ 0.76
PTPN1P18031 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN1P18031 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN1P18031 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN1P18031 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
PTPN1P18031 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPN1P18031 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN1P18031 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN1P18031 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN1P18031 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PTPN1P18031 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PTPN1P18031 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN1P18031 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 KRT18P23-201ENST00000435622 1283 ntBASIC19.81■□□□□ 0.76
PTPN1P18031 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN1P18031 HOMER2P1-201ENST00000455653 964 ntBASIC19.81■□□□□ 0.76
PTPN1P18031 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.81■□□□□ 0.76
PTPN1P18031 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.81■□□□□ 0.76
PTPN1P18031 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.81■□□□□ 0.76
PTPN1P18031 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN1P18031 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN1P18031 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN1P18031 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN1P18031 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN1P18031 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN1P18031 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
PTPN1P18031 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 AC034236.2-201ENST00000606662 1610 ntBASIC19.8■□□□□ 0.76
PTPN1P18031 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PTPN1P18031 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN1P18031 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN1P18031 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.8■□□□□ 0.76
PTPN1P18031 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN1P18031 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN1P18031 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN1P18031 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN1P18031 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN1P18031 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN1P18031 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN1P18031 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 AL020996.1-203ENST00000536896 2307 ntBASIC19.8■□□□□ 0.76
PTPN1P18031 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN1P18031 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN1P18031 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN1P18031 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN1P18031 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN1P18031 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN1P18031 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN1P18031 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PTPN1P18031 KRT8P7-201ENST00000533003 1432 ntBASIC19.79■□□□□ 0.76
PTPN1P18031 HOXB1-202ENST00000577092 1414 ntBASIC19.79■□□□□ 0.76
PTPN1P18031 ARMC10P1-201ENST00000313754 855 ntBASIC19.79■□□□□ 0.76
PTPN1P18031 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN1P18031 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN1P18031 KRT18P38-201ENST00000449496 1282 ntBASIC19.79■□□□□ 0.76
PTPN1P18031 AL359075.1-203ENST00000462729 1002 ntBASIC19.79■□□□□ 0.76
PTPN1P18031 SEC1P-202ENST00000473944 940 ntBASIC19.79■□□□□ 0.76
PTPN1P18031 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN1P18031 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.79■□□□□ 0.76
PTPN1P18031 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.79■□□□□ 0.76
PTPN1P18031 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN1P18031 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN1P18031 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PTPN1P18031 Z98044.1-201ENST00000632503 1764 ntBASIC19.79■□□□□ 0.76
PTPN1P18031 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN1P18031 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms