Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.88■■□□□ 1.25
COL11A2P13942 MTMR9LP-203ENST00000426597 1545 ntBASIC22.88■■□□□ 1.25
COL11A2P13942 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL11A2P13942 Z98044.1-201ENST00000632503 1764 ntBASIC22.88■■□□□ 1.25
COL11A2P13942 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL11A2P13942 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
COL11A2P13942 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL11A2P13942 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.88■■□□□ 1.25
COL11A2P13942 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
COL11A2P13942 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL11A2P13942 FGFR3P6-201ENST00000457012 610 ntBASIC22.88■■□□□ 1.25
COL11A2P13942 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC22.88■■□□□ 1.25
COL11A2P13942 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.88■■□□□ 1.25
COL11A2P13942 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL11A2P13942 AC064862.7-201ENST00000604520 867 ntBASIC22.88■■□□□ 1.25
COL11A2P13942 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.88■■□□□ 1.25
COL11A2P13942 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.88■■□□□ 1.25
COL11A2P13942 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL11A2P13942 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
COL11A2P13942 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.87■■□□□ 1.25
COL11A2P13942 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL11A2P13942 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL11A2P13942 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL11A2P13942 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.87■■□□□ 1.25
COL11A2P13942 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL11A2P13942 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL11A2P13942 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
COL11A2P13942 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
COL11A2P13942 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
COL11A2P13942 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC22.87■■□□□ 1.25
COL11A2P13942 AC009065.1-201ENST00000564055 1225 ntBASIC22.87■■□□□ 1.25
COL11A2P13942 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL11A2P13942 AC068587.9-201ENST00000641814 219 ntBASIC22.87■■□□□ 1.25
COL11A2P13942 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL11A2P13942 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL11A2P13942 LINC01521-201ENST00000504184 1943 ntBASIC22.87■■□□□ 1.25
COL11A2P13942 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL11A2P13942 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL11A2P13942 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL11A2P13942 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
COL11A2P13942 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL11A2P13942 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL11A2P13942 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL11A2P13942 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL11A2P13942 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL11A2P13942 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
COL11A2P13942 COX10-202ENST00000429152 875 ntTSL 2 BASIC22.86■■□□□ 1.25
COL11A2P13942 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.86■■□□□ 1.25
COL11A2P13942 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC22.86■■□□□ 1.25
COL11A2P13942 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
COL11A2P13942 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.86■■□□□ 1.25
COL11A2P13942 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC22.86■■□□□ 1.25
COL11A2P13942 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
COL11A2P13942 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
COL11A2P13942 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.86■■□□□ 1.25
COL11A2P13942 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
COL11A2P13942 AL357033.4-201ENST00000617703 1807 ntBASIC22.86■■□□□ 1.25
COL11A2P13942 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL11A2P13942 AC112907.3-201ENST00000577781 2400 ntBASIC22.86■■□□□ 1.25
COL11A2P13942 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
COL11A2P13942 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL11A2P13942 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.86■■□□□ 1.25
COL11A2P13942 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
COL11A2P13942 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
COL11A2P13942 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL11A2P13942 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL11A2P13942 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
COL11A2P13942 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC22.85■■□□□ 1.25
COL11A2P13942 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL11A2P13942 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL11A2P13942 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC22.85■■□□□ 1.25
COL11A2P13942 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL11A2P13942 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL11A2P13942 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL11A2P13942 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.85■■□□□ 1.25
COL11A2P13942 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.85■■□□□ 1.25
COL11A2P13942 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL11A2P13942 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.85■■□□□ 1.25
COL11A2P13942 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL11A2P13942 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL11A2P13942 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL11A2P13942 HNRNPDP1-201ENST00000439535 754 ntBASIC22.85■■□□□ 1.25
COL11A2P13942 AC092183.1-201ENST00000469884 875 ntBASIC22.85■■□□□ 1.25
COL11A2P13942 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.85■■□□□ 1.25
COL11A2P13942 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22.85■■□□□ 1.25
COL11A2P13942 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC22.85■■□□□ 1.25
COL11A2P13942 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.85■■□□□ 1.25
COL11A2P13942 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.85■■□□□ 1.25
COL11A2P13942 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL11A2P13942 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL11A2P13942 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.84■■□□□ 1.25
COL11A2P13942 IRX1P1-201ENST00000438849 1838 ntBASIC22.84■■□□□ 1.25
COL11A2P13942 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL11A2P13942 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL11A2P13942 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL11A2P13942 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC22.84■■□□□ 1.25
COL11A2P13942 HMGN1P19-201ENST00000436976 333 ntBASIC22.84■■□□□ 1.25
COL11A2P13942 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
COL11A2P13942 IGHV3-22-201ENST00000520721 359 ntBASIC22.84■■□□□ 1.25
COL11A2P13942 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms