Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT3P12035 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT3P12035 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT3P12035 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.73■□□□□ 0.75
KRT3P12035 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT3P12035 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT3P12035 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT3P12035 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT3P12035 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT3P12035 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT3P12035 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT3P12035 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.73■□□□□ 0.75
KRT3P12035 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
KRT3P12035 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
KRT3P12035 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT3P12035 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT3P12035 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT3P12035 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT3P12035 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.72■□□□□ 0.75
KRT3P12035 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
KRT3P12035 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT3P12035 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.72■□□□□ 0.75
KRT3P12035 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT3P12035 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.72■□□□□ 0.75
KRT3P12035 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT3P12035 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
KRT3P12035 AP000525.1-201ENST00000608286 694 ntBASIC19.72■□□□□ 0.75
KRT3P12035 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.72■□□□□ 0.75
KRT3P12035 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.72■□□□□ 0.75
KRT3P12035 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT3P12035 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT3P12035 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRT3P12035 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
KRT3P12035 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT3P12035 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT3P12035 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
KRT3P12035 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.71■□□□□ 0.75
KRT3P12035 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.71■□□□□ 0.75
KRT3P12035 AL355075.4-201ENST00000554988 638 ntBASIC19.71■□□□□ 0.75
KRT3P12035 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.71■□□□□ 0.75
KRT3P12035 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 AL357033.4-201ENST00000617703 1807 ntBASIC19.71■□□□□ 0.75
KRT3P12035 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
KRT3P12035 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRT3P12035 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.71■□□□□ 0.74
KRT3P12035 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT3P12035 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
KRT3P12035 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT3P12035 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT3P12035 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT3P12035 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT3P12035 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT3P12035 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT3P12035 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT3P12035 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KRT3P12035 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT3P12035 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.7■□□□□ 0.74
KRT3P12035 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.7■□□□□ 0.74
KRT3P12035 FITM1-202ENST00000559294 800 ntBASIC19.7■□□□□ 0.74
KRT3P12035 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT3P12035 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT3P12035 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT3P12035 AL109659.2-201ENST00000606809 1674 ntBASIC19.7■□□□□ 0.74
KRT3P12035 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
KRT3P12035 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT3P12035 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KRT3P12035 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT3P12035 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT3P12035 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KRT3P12035 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KRT3P12035 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.7■□□□□ 0.74
KRT3P12035 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT3P12035 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.7■□□□□ 0.74
KRT3P12035 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT3P12035 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT3P12035 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT3P12035 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT3P12035 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT3P12035 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT3P12035 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT3P12035 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
KRT3P12035 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT3P12035 AC104581.1-202ENST00000635932 2618 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms