Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40ALP0C0E4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 KRT18P48-201ENST00000434763 852 ntBASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 SPDYE13P-201ENST00000445314 798 ntBASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 AC112497.1-201ENST00000624824 639 ntBASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 KRT8P7-201ENST00000533003 1432 ntBASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40ALP0C0E4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 AL109659.2-201ENST00000606809 1674 ntBASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 TEX21P-204ENST00000641479 1693 ntBASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 SEC1P-202ENST00000473944 940 ntBASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40ALP0C0E4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 AL645929.1-201ENST00000420084 975 ntBASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 HCG4P8-203ENST00000443049 980 ntBASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 KRT126P-201ENST00000549467 1181 ntBASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms