Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.78■□□□□ 0.76
RB1P06400 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RB1P06400 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RB1P06400 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RB1P06400 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RB1P06400 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
RB1P06400 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RB1P06400 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RB1P06400 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RB1P06400 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RB1P06400 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RB1P06400 FAM197Y8-203ENST00000450145 560 ntBASIC19.77■□□□□ 0.76
RB1P06400 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.77■□□□□ 0.76
RB1P06400 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.77■□□□□ 0.76
RB1P06400 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RB1P06400 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.77■□□□□ 0.76
RB1P06400 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.77■□□□□ 0.76
RB1P06400 AP005901.3-202ENST00000581653 237 ntBASIC19.77■□□□□ 0.76
RB1P06400 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.77■□□□□ 0.76
RB1P06400 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RB1P06400 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RB1P06400 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RB1P06400 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RB1P06400 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RB1P06400 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RB1P06400 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.77■□□□□ 0.76
RB1P06400 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.77■□□□□ 0.76
RB1P06400 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RB1P06400 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RB1P06400 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.76■□□□□ 0.75
RB1P06400 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RB1P06400 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RB1P06400 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RB1P06400 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RB1P06400 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RB1P06400 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RB1P06400 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.76■□□□□ 0.75
RB1P06400 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.76■□□□□ 0.75
RB1P06400 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.76■□□□□ 0.75
RB1P06400 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RB1P06400 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RB1P06400 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.76■□□□□ 0.75
RB1P06400 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RB1P06400 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.76■□□□□ 0.75
RB1P06400 TP73-AS1-207ENST00000624167 988 ntBASIC19.76■□□□□ 0.75
RB1P06400 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RB1P06400 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.76■□□□□ 0.75
RB1P06400 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.76■□□□□ 0.75
RB1P06400 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RB1P06400 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RB1P06400 TEX21P-204ENST00000641479 1693 ntBASIC19.75■□□□□ 0.75
RB1P06400 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RB1P06400 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RB1P06400 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RB1P06400 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RB1P06400 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RB1P06400 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.75■□□□□ 0.75
RB1P06400 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RB1P06400 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.75■□□□□ 0.75
RB1P06400 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.75■□□□□ 0.75
RB1P06400 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.75■□□□□ 0.75
RB1P06400 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RB1P06400 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RB1P06400 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.75■□□□□ 0.75
RB1P06400 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.75■□□□□ 0.75
RB1P06400 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RB1P06400 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RB1P06400 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RB1P06400 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RB1P06400 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
RB1P06400 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.75■□□□□ 0.75
RB1P06400 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.74■□□□□ 0.75
RB1P06400 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RB1P06400 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RB1P06400 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RB1P06400 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RB1P06400 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RB1P06400 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RB1P06400 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.74■□□□□ 0.75
RB1P06400 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.74■□□□□ 0.75
RB1P06400 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.74■□□□□ 0.75
RB1P06400 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RB1P06400 AL031284.1-201ENST00000419297 478 ntBASIC19.74■□□□□ 0.75
RB1P06400 KRT18P67-201ENST00000432816 1264 ntBASIC19.74■□□□□ 0.75
RB1P06400 KRT18P58-201ENST00000527480 1120 ntBASIC19.74■□□□□ 0.75
RB1P06400 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.74■□□□□ 0.75
RB1P06400 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.74■□□□□ 0.75
RB1P06400 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.74■□□□□ 0.75
RB1P06400 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RB1P06400 AL591684.3-201ENST00000605187 298 ntBASIC19.74■□□□□ 0.75
RB1P06400 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RB1P06400 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.74■□□□□ 0.75
RB1P06400 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RB1P06400 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RB1P06400 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RB1P06400 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RB1P06400 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
RB1P06400 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms