Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCCBP05166 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.54■□□□□ 0.56
PCCBP05166 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCCBP05166 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCCBP05166 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 MIR564-202ENST00000385049 94 ntBASIC18.53■□□□□ 0.56
PCCBP05166 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.53■□□□□ 0.56
PCCBP05166 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.53■□□□□ 0.56
PCCBP05166 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.53■□□□□ 0.56
PCCBP05166 RASA4DP-201ENST00000460726 1199 ntBASIC18.53■□□□□ 0.56
PCCBP05166 SEC1P-202ENST00000473944 940 ntBASIC18.53■□□□□ 0.56
PCCBP05166 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
PCCBP05166 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.53■□□□□ 0.56
PCCBP05166 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.53■□□□□ 0.56
PCCBP05166 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.53■□□□□ 0.56
PCCBP05166 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PCCBP05166 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.53■□□□□ 0.56
PCCBP05166 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCCBP05166 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.53■□□□□ 0.56
PCCBP05166 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.52■□□□□ 0.56
PCCBP05166 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCCBP05166 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCCBP05166 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.52■□□□□ 0.56
PCCBP05166 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCCBP05166 AC138932.1-201ENST00000534164 6830 ntBASIC18.52■□□□□ 0.56
PCCBP05166 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.52■□□□□ 0.56
PCCBP05166 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.52■□□□□ 0.56
PCCBP05166 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCCBP05166 LINC01311-201ENST00000565162 1445 ntBASIC18.52■□□□□ 0.56
PCCBP05166 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.52■□□□□ 0.56
PCCBP05166 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCCBP05166 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCCBP05166 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.52■□□□□ 0.56
PCCBP05166 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.52■□□□□ 0.56
PCCBP05166 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCCBP05166 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.52■□□□□ 0.56
PCCBP05166 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.52■□□□□ 0.56
PCCBP05166 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.52■□□□□ 0.56
PCCBP05166 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCCBP05166 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCCBP05166 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCCBP05166 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.52■□□□□ 0.55
PCCBP05166 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCCBP05166 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCCBP05166 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCCBP05166 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCCBP05166 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.51■□□□□ 0.55
PCCBP05166 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.51■□□□□ 0.55
PCCBP05166 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.51■□□□□ 0.55
PCCBP05166 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCCBP05166 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.51■□□□□ 0.55
PCCBP05166 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.51■□□□□ 0.55
PCCBP05166 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.51■□□□□ 0.55
PCCBP05166 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.51■□□□□ 0.55
PCCBP05166 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.51■□□□□ 0.55
PCCBP05166 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.51■□□□□ 0.55
PCCBP05166 AL121956.5-201ENST00000625261 221 ntBASIC18.51■□□□□ 0.55
PCCBP05166 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PCCBP05166 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.51■□□□□ 0.55
PCCBP05166 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.51■□□□□ 0.55
PCCBP05166 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.51■□□□□ 0.55
PCCBP05166 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCCBP05166 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCCBP05166 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.5■□□□□ 0.55
PCCBP05166 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCCBP05166 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCCBP05166 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.5■□□□□ 0.55
PCCBP05166 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms