Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.1■□□□□ 0.33
P04436 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
P04436 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.1■□□□□ 0.33
P04436 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.1■□□□□ 0.33
P04436 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.1■□□□□ 0.33
P04436 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
P04436 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.1■□□□□ 0.33
P04436 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.1■□□□□ 0.33
P04436 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
P04436 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.1■□□□□ 0.33
P04436 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
P04436 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.1■□□□□ 0.33
P04436 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
P04436 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P04436 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
P04436 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
P04436 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
P04436 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P04436 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 STARP1-201ENST00000397973 869 ntBASIC17.09■□□□□ 0.33
P04436 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.09■□□□□ 0.33
P04436 KRT18P23-201ENST00000435622 1283 ntBASIC17.09■□□□□ 0.33
P04436 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.09■□□□□ 0.33
P04436 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.09■□□□□ 0.33
P04436 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
P04436 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.09■□□□□ 0.33
P04436 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
P04436 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.09■□□□□ 0.33
P04436 KRT8P7-201ENST00000533003 1432 ntBASIC17.09■□□□□ 0.33
P04436 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.09■□□□□ 0.33
P04436 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.09■□□□□ 0.33
P04436 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.09■□□□□ 0.33
P04436 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 AL161938.1-201ENST00000569833 2180 ntBASIC17.09■□□□□ 0.33
P04436 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04436 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
P04436 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
P04436 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.08■□□□□ 0.33
P04436 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04436 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04436 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04436 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.08■□□□□ 0.32
P04436 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.08■□□□□ 0.32
P04436 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.08■□□□□ 0.32
P04436 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 MIR564-202ENST00000385049 94 ntBASIC17.08■□□□□ 0.32
P04436 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.08■□□□□ 0.32
P04436 AL671277.2-201ENST00000458060 996 ntBASIC17.08■□□□□ 0.32
P04436 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.08■□□□□ 0.32
P04436 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.08■□□□□ 0.32
P04436 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.08■□□□□ 0.32
P04436 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.08■□□□□ 0.32
P04436 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
P04436 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.08■□□□□ 0.32
P04436 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
P04436 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.08■□□□□ 0.32
P04436 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.08■□□□□ 0.32
P04436 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04436 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms