Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.37■□□□□ 0.85
CHRNA1P02708 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.37■□□□□ 0.85
CHRNA1P02708 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.37■□□□□ 0.85
CHRNA1P02708 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.37■□□□□ 0.85
CHRNA1P02708 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.37■□□□□ 0.85
CHRNA1P02708 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHRNA1P02708 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA1P02708 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRNA1P02708 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA1P02708 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CHRNA1P02708 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
CHRNA1P02708 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA1P02708 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA1P02708 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA1P02708 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.36■□□□□ 0.85
CHRNA1P02708 TOB2P1-201ENST00000469761 992 ntBASIC20.36■□□□□ 0.85
CHRNA1P02708 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.36■□□□□ 0.85
CHRNA1P02708 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.36■□□□□ 0.85
CHRNA1P02708 IFNL4P1-201ENST00000607083 540 ntBASIC20.36■□□□□ 0.85
CHRNA1P02708 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA1P02708 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.36■□□□□ 0.85
CHRNA1P02708 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA1P02708 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRNA1P02708 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CHRNA1P02708 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CHRNA1P02708 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.36■□□□□ 0.85
CHRNA1P02708 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CHRNA1P02708 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA1P02708 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA1P02708 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA1P02708 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CHRNA1P02708 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA1P02708 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA1P02708 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRNA1P02708 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRNA1P02708 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CHRNA1P02708 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA1P02708 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.35■□□□□ 0.85
CHRNA1P02708 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.35■□□□□ 0.85
CHRNA1P02708 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRNA1P02708 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.35■□□□□ 0.85
CHRNA1P02708 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.35■□□□□ 0.85
CHRNA1P02708 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.35■□□□□ 0.85
CHRNA1P02708 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA1P02708 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CHRNA1P02708 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.35■□□□□ 0.85
CHRNA1P02708 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA1P02708 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA1P02708 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA1P02708 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA1P02708 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRNA1P02708 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA1P02708 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA1P02708 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.34■□□□□ 0.85
CHRNA1P02708 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA1P02708 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA1P02708 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CHRNA1P02708 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CHRNA1P02708 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA1P02708 KRT17P6-201ENST00000453795 1220 ntBASIC20.34■□□□□ 0.85
CHRNA1P02708 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA1P02708 AC012615.1-201ENST00000565797 1299 ntBASIC20.34■□□□□ 0.85
CHRNA1P02708 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRNA1P02708 AC090616.6-201ENST00000582640 721 ntBASIC20.34■□□□□ 0.85
CHRNA1P02708 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA1P02708 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA1P02708 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA1P02708 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA1P02708 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA1P02708 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRNA1P02708 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.34■□□□□ 0.85
CHRNA1P02708 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHRNA1P02708 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHRNA1P02708 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.33■□□□□ 0.85
CHRNA1P02708 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CHRNA1P02708 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRNA1P02708 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRNA1P02708 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRNA1P02708 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CHRNA1P02708 FAAHP1-202ENST00000446499 1238 ntBASIC20.33■□□□□ 0.85
CHRNA1P02708 EMBP1-201ENST00000458200 901 ntBASIC20.33■□□□□ 0.85
CHRNA1P02708 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.33■□□□□ 0.85
CHRNA1P02708 FOSL1P1-201ENST00000511041 816 ntBASIC20.33■□□□□ 0.85
CHRNA1P02708 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.33■□□□□ 0.85
CHRNA1P02708 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHRNA1P02708 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHRNA1P02708 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHRNA1P02708 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.33■□□□□ 0.84
CHRNA1P02708 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHRNA1P02708 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHRNA1P02708 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.33■□□□□ 0.84
CHRNA1P02708 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHRNA1P02708 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.33■□□□□ 0.84
CHRNA1P02708 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNA1P02708 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNA1P02708 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNA1P02708 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CHRNA1P02708 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNA1P02708 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHRNA1P02708 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms