Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.54■■□□□ 1.2
COL1A1P02452 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A1P02452 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC22.54■■□□□ 1.2
COL1A1P02452 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC22.54■■□□□ 1.2
COL1A1P02452 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
COL1A1P02452 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.53■■□□□ 1.2
COL1A1P02452 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A1P02452 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A1P02452 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.53■■□□□ 1.2
COL1A1P02452 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A1P02452 AL357033.4-201ENST00000617703 1807 ntBASIC22.53■■□□□ 1.2
COL1A1P02452 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A1P02452 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A1P02452 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
COL1A1P02452 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A1P02452 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
COL1A1P02452 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A1P02452 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC22.53■■□□□ 1.2
COL1A1P02452 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A1P02452 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC22.53■■□□□ 1.2
COL1A1P02452 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
COL1A1P02452 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.53■■□□□ 1.2
COL1A1P02452 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.52■■□□□ 1.2
COL1A1P02452 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.52■■□□□ 1.2
COL1A1P02452 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL1A1P02452 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL1A1P02452 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.52■■□□□ 1.2
COL1A1P02452 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.52■■□□□ 1.2
COL1A1P02452 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.52■■□□□ 1.2
COL1A1P02452 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL1A1P02452 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC22.52■■□□□ 1.2
COL1A1P02452 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL1A1P02452 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL1A1P02452 CHCHD2P8-201ENST00000429873 447 ntBASIC22.52■■□□□ 1.2
COL1A1P02452 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC22.52■■□□□ 1.2
COL1A1P02452 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC22.52■■□□□ 1.2
COL1A1P02452 KRT8P26-201ENST00000534154 1276 ntBASIC22.52■■□□□ 1.2
COL1A1P02452 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL1A1P02452 IFNL4P1-201ENST00000607083 540 ntBASIC22.52■■□□□ 1.2
COL1A1P02452 LITAF-220ENST00000620789 692 ntTSL 5 BASIC22.52■■□□□ 1.2
COL1A1P02452 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL1A1P02452 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.52■■□□□ 1.19
COL1A1P02452 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
COL1A1P02452 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
COL1A1P02452 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.51■■□□□ 1.19
COL1A1P02452 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL1A1P02452 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL1A1P02452 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.51■■□□□ 1.19
COL1A1P02452 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.51■■□□□ 1.19
COL1A1P02452 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL1A1P02452 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
COL1A1P02452 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
COL1A1P02452 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
COL1A1P02452 PVRIG2P-201ENST00000435460 978 ntBASIC22.51■■□□□ 1.19
COL1A1P02452 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.51■■□□□ 1.19
COL1A1P02452 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC22.51■■□□□ 1.19
COL1A1P02452 TEN1-204ENST00000588202 862 ntTSL 3 BASIC22.51■■□□□ 1.19
COL1A1P02452 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC22.51■■□□□ 1.19
COL1A1P02452 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.51■■□□□ 1.19
COL1A1P02452 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL1A1P02452 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
COL1A1P02452 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.51■■□□□ 1.19
COL1A1P02452 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
COL1A1P02452 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL1A1P02452 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A1P02452 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A1P02452 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.5■■□□□ 1.19
COL1A1P02452 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
COL1A1P02452 AP002414.4-201ENST00000589764 1148 ntBASIC22.5■■□□□ 1.19
COL1A1P02452 AC083906.6-201ENST00000641366 219 ntBASIC22.5■■□□□ 1.19
COL1A1P02452 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.5■■□□□ 1.19
COL1A1P02452 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A1P02452 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A1P02452 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A1P02452 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A1P02452 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.5■■□□□ 1.19
COL1A1P02452 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.5■■□□□ 1.19
COL1A1P02452 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A1P02452 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
COL1A1P02452 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A1P02452 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A1P02452 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A1P02452 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A1P02452 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A1P02452 NUS1P1-201ENST00000446295 882 ntBASIC22.49■■□□□ 1.19
COL1A1P02452 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A1P02452 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A1P02452 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC22.49■■□□□ 1.19
COL1A1P02452 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
COL1A1P02452 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A1P02452 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.49■■□□□ 1.19
COL1A1P02452 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.49■■□□□ 1.19
COL1A1P02452 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A1P02452 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A1P02452 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms