Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
MBD3O95983 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD3O95983 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
MBD3O95983 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.47■■□□□ 1.03
MBD3O95983 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD3O95983 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MBD3O95983 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.47■■□□□ 1.03
MBD3O95983 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD3O95983 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MBD3O95983 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD3O95983 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD3O95983 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD3O95983 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD3O95983 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
MBD3O95983 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD3O95983 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MBD3O95983 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.47■■□□□ 1.03
MBD3O95983 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
MBD3O95983 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.47■■□□□ 1.03
MBD3O95983 AL160286.2-201ENST00000567150 934 ntBASIC21.47■■□□□ 1.03
MBD3O95983 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
MBD3O95983 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.47■■□□□ 1.03
MBD3O95983 MIR6821-201ENST00000617625 74 ntBASIC21.47■■□□□ 1.03
MBD3O95983 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
MBD3O95983 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
MBD3O95983 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MBD3O95983 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.46■■□□□ 1.03
MBD3O95983 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD3O95983 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MBD3O95983 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
MBD3O95983 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.46■■□□□ 1.03
MBD3O95983 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MBD3O95983 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.46■■□□□ 1.03
MBD3O95983 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MBD3O95983 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
MBD3O95983 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MBD3O95983 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MBD3O95983 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.46■■□□□ 1.03
MBD3O95983 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.46■■□□□ 1.03
MBD3O95983 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.46■■□□□ 1.03
MBD3O95983 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.46■■□□□ 1.03
MBD3O95983 AL121829.2-201ENST00000620908 328 ntBASIC21.46■■□□□ 1.03
MBD3O95983 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
MBD3O95983 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD3O95983 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD3O95983 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
MBD3O95983 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
MBD3O95983 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
MBD3O95983 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
MBD3O95983 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD3O95983 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD3O95983 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.45■■□□□ 1.02
MBD3O95983 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
MBD3O95983 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
MBD3O95983 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
MBD3O95983 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.45■■□□□ 1.02
MBD3O95983 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.45■■□□□ 1.02
MBD3O95983 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.45■■□□□ 1.02
MBD3O95983 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 AC087623.3-201ENST00000607047 1098 ntBASIC21.45■■□□□ 1.02
MBD3O95983 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.45■■□□□ 1.02
MBD3O95983 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.45■■□□□ 1.02
MBD3O95983 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.45■■□□□ 1.02
MBD3O95983 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 KRT8P45-201ENST00000414328 1447 ntBASIC21.45■■□□□ 1.02
MBD3O95983 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.45■■□□□ 1.02
MBD3O95983 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3O95983 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.44■■□□□ 1.02
MBD3O95983 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
MBD3O95983 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MBD3O95983 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MBD3O95983 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.44■■□□□ 1.02
MBD3O95983 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
MBD3O95983 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.44■■□□□ 1.02
MBD3O95983 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.44■■□□□ 1.02
MBD3O95983 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
MBD3O95983 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.44■■□□□ 1.02
MBD3O95983 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.44■■□□□ 1.02
MBD3O95983 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MBD3O95983 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MBD3O95983 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
MBD3O95983 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.44■■□□□ 1.02
MBD3O95983 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.44■■□□□ 1.02
MBD3O95983 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MBD3O95983 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MBD3O95983 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms