Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF1O95521 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF1O95521 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF1O95521 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF1O95521 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF1O95521 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF1O95521 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF1O95521 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF1O95521 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 AC012306.2-201ENST00000609350 630 ntBASIC18.6■□□□□ 0.57
PRAMEF1O95521 CR769767.2-201ENST00000622735 460 ntBASIC18.6■□□□□ 0.57
PRAMEF1O95521 AC097493.4-201ENST00000641197 219 ntBASIC18.6■□□□□ 0.57
PRAMEF1O95521 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF1O95521 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF1O95521 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF1O95521 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PRAMEF1O95521 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF1O95521 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF1O95521 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 KRT8P45-201ENST00000414328 1447 ntBASIC18.59■□□□□ 0.57
PRAMEF1O95521 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEF1O95521 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.59■□□□□ 0.57
PRAMEF1O95521 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.59■□□□□ 0.57
PRAMEF1O95521 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEF1O95521 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PRAMEF1O95521 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PRAMEF1O95521 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PRAMEF1O95521 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEF1O95521 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.59■□□□□ 0.57
PRAMEF1O95521 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PRAMEF1O95521 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PRAMEF1O95521 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEF1O95521 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PRAMEF1O95521 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF1O95521 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF1O95521 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF1O95521 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF1O95521 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF1O95521 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF1O95521 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PRAMEF1O95521 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF1O95521 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF1O95521 MIR564-202ENST00000385049 94 ntBASIC18.58■□□□□ 0.56
PRAMEF1O95521 AC211429.1-201ENST00000415277 523 ntBASIC18.58■□□□□ 0.56
PRAMEF1O95521 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 WWOX-216ENST00000569818 525 ntBASIC18.58■□□□□ 0.56
PRAMEF1O95521 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF1O95521 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF1O95521 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF1O95521 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF1O95521 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF1O95521 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PRAMEF1O95521 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF1O95521 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF1O95521 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF1O95521 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PRAMEF1O95521 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF1O95521 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF1O95521 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF1O95521 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF1O95521 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms