Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLSTN1O94985 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLSTN1O94985 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CLSTN1O94985 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLSTN1O94985 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLSTN1O94985 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CLSTN1O94985 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLSTN1O94985 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.72■□□□□ 0.91
CLSTN1O94985 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.72■□□□□ 0.91
CLSTN1O94985 AC026471.5-201ENST00000615068 467 ntBASIC20.72■□□□□ 0.91
CLSTN1O94985 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CLSTN1O94985 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLSTN1O94985 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CLSTN1O94985 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLSTN1O94985 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLSTN1O94985 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.72■□□□□ 0.91
CLSTN1O94985 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLSTN1O94985 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.71■□□□□ 0.91
CLSTN1O94985 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CLSTN1O94985 AC004980.1-204ENST00000429707 299 ntBASIC20.71■□□□□ 0.91
CLSTN1O94985 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.71■□□□□ 0.91
CLSTN1O94985 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.71■□□□□ 0.91
CLSTN1O94985 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.71■□□□□ 0.91
CLSTN1O94985 MIR4785-201ENST00000585005 73 ntBASIC20.71■□□□□ 0.91
CLSTN1O94985 AC011298.2-201ENST00000617989 482 ntBASIC20.71■□□□□ 0.91
CLSTN1O94985 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.71■□□□□ 0.91
CLSTN1O94985 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CLSTN1O94985 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.71■□□□□ 0.91
CLSTN1O94985 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.71■□□□□ 0.91
CLSTN1O94985 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.71■□□□□ 0.91
CLSTN1O94985 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLSTN1O94985 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.71■□□□□ 0.91
CLSTN1O94985 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLSTN1O94985 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLSTN1O94985 FLJ16779-201ENST00000612722 7638 ntBASIC20.7■□□□□ 0.9
CLSTN1O94985 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC20.7■□□□□ 0.9
CLSTN1O94985 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLSTN1O94985 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
CLSTN1O94985 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLSTN1O94985 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLSTN1O94985 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.7■□□□□ 0.9
CLSTN1O94985 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.7■□□□□ 0.9
CLSTN1O94985 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLSTN1O94985 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLSTN1O94985 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLSTN1O94985 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLSTN1O94985 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CLSTN1O94985 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.7■□□□□ 0.9
CLSTN1O94985 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.7■□□□□ 0.9
CLSTN1O94985 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.7■□□□□ 0.9
CLSTN1O94985 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLSTN1O94985 FER1L4-210ENST00000615531 5998 ntBASIC20.7■□□□□ 0.9
CLSTN1O94985 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLSTN1O94985 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLSTN1O94985 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.69■□□□□ 0.9
CLSTN1O94985 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLSTN1O94985 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLSTN1O94985 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLSTN1O94985 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLSTN1O94985 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.69■□□□□ 0.9
CLSTN1O94985 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLSTN1O94985 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CLSTN1O94985 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLSTN1O94985 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CLSTN1O94985 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.69■□□□□ 0.9
CLSTN1O94985 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CLSTN1O94985 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.69■□□□□ 0.9
CLSTN1O94985 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.69■□□□□ 0.9
CLSTN1O94985 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.69■□□□□ 0.9
CLSTN1O94985 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.69■□□□□ 0.9
CLSTN1O94985 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CLSTN1O94985 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.69■□□□□ 0.9
CLSTN1O94985 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CLSTN1O94985 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CLSTN1O94985 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLSTN1O94985 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLSTN1O94985 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLSTN1O94985 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLSTN1O94985 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms