Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 NIFKP9-201ENST00000419265 221 ntBASIC18.56■□□□□ 0.56
SUPT3HO75486 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.56■□□□□ 0.56
SUPT3HO75486 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SUPT3HO75486 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.56■□□□□ 0.56
SUPT3HO75486 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.56■□□□□ 0.56
SUPT3HO75486 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.56■□□□□ 0.56
SUPT3HO75486 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SUPT3HO75486 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SUPT3HO75486 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SUPT3HO75486 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SUPT3HO75486 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SUPT3HO75486 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.55■□□□□ 0.56
SUPT3HO75486 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SUPT3HO75486 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SUPT3HO75486 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SUPT3HO75486 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SUPT3HO75486 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SUPT3HO75486 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.55■□□□□ 0.56
SUPT3HO75486 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SUPT3HO75486 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SUPT3HO75486 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.55■□□□□ 0.56
SUPT3HO75486 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.55■□□□□ 0.56
SUPT3HO75486 AC090164.3-201ENST00000610780 2143 ntBASIC18.55■□□□□ 0.56
SUPT3HO75486 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SUPT3HO75486 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SUPT3HO75486 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.55■□□□□ 0.56
SUPT3HO75486 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.55■□□□□ 0.56
SUPT3HO75486 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SUPT3HO75486 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SUPT3HO75486 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.55■□□□□ 0.56
SUPT3HO75486 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.55■□□□□ 0.56
SUPT3HO75486 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SUPT3HO75486 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SUPT3HO75486 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.55■□□□□ 0.56
SUPT3HO75486 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.55■□□□□ 0.56
SUPT3HO75486 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.55■□□□□ 0.56
SUPT3HO75486 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
SUPT3HO75486 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SUPT3HO75486 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.54■□□□□ 0.56
SUPT3HO75486 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.54■□□□□ 0.56
SUPT3HO75486 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.54■□□□□ 0.56
SUPT3HO75486 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.54■□□□□ 0.56
SUPT3HO75486 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.54■□□□□ 0.56
SUPT3HO75486 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SUPT3HO75486 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.54■□□□□ 0.56
SUPT3HO75486 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
SUPT3HO75486 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SUPT3HO75486 AC004980.1-204ENST00000429707 299 ntBASIC18.54■□□□□ 0.56
SUPT3HO75486 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.54■□□□□ 0.56
SUPT3HO75486 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.54■□□□□ 0.56
SUPT3HO75486 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 KRT8P11-201ENST00000409686 1436 ntBASIC18.54■□□□□ 0.56
SUPT3HO75486 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.54■□□□□ 0.56
SUPT3HO75486 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
SUPT3HO75486 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SUPT3HO75486 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SUPT3HO75486 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SUPT3HO75486 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SUPT3HO75486 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.54■□□□□ 0.56
SUPT3HO75486 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SUPT3HO75486 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.53■□□□□ 0.56
SUPT3HO75486 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SUPT3HO75486 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT3HO75486 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.53■□□□□ 0.56
SUPT3HO75486 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.53■□□□□ 0.56
SUPT3HO75486 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT3HO75486 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT3HO75486 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT3HO75486 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT3HO75486 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.53■□□□□ 0.56
SUPT3HO75486 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT3HO75486 POU5F1P3-201ENST00000428824 1078 ntBASIC18.53■□□□□ 0.56
SUPT3HO75486 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.53■□□□□ 0.56
SUPT3HO75486 RPS2P4-201ENST00000476944 856 ntBASIC18.53■□□□□ 0.56
SUPT3HO75486 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SUPT3HO75486 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.53■□□□□ 0.56
SUPT3HO75486 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.53■□□□□ 0.56
SUPT3HO75486 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.53■□□□□ 0.56
SUPT3HO75486 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.53■□□□□ 0.56
SUPT3HO75486 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms