Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.54■■□□□ 1.36
CACNA1FO60840 AL024508.2-201ENST00000607749 1894 ntBASIC23.54■■□□□ 1.36
CACNA1FO60840 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CACNA1FO60840 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.54■■□□□ 1.36
CACNA1FO60840 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CACNA1FO60840 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CACNA1FO60840 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC23.54■■□□□ 1.36
CACNA1FO60840 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CACNA1FO60840 AC018445.3-201ENST00000624177 1945 ntBASIC23.54■■□□□ 1.36
CACNA1FO60840 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CACNA1FO60840 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.54■■□□□ 1.36
CACNA1FO60840 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CACNA1FO60840 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CACNA1FO60840 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.54■■□□□ 1.36
CACNA1FO60840 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CACNA1FO60840 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CACNA1FO60840 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CACNA1FO60840 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.54■■□□□ 1.36
CACNA1FO60840 AC140113.3-201ENST00000605663 199 ntBASIC23.54■■□□□ 1.36
CACNA1FO60840 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CACNA1FO60840 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.54■■□□□ 1.36
CACNA1FO60840 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CACNA1FO60840 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC23.53■■□□□ 1.36
CACNA1FO60840 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CACNA1FO60840 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC23.53■■□□□ 1.36
CACNA1FO60840 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
CACNA1FO60840 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CACNA1FO60840 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CACNA1FO60840 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC23.53■■□□□ 1.36
CACNA1FO60840 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.53■■□□□ 1.36
CACNA1FO60840 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CACNA1FO60840 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CACNA1FO60840 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CACNA1FO60840 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC23.52■■□□□ 1.36
CACNA1FO60840 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC23.52■■□□□ 1.36
CACNA1FO60840 AC079602.3-201ENST00000623931 403 ntBASIC23.52■■□□□ 1.36
CACNA1FO60840 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CACNA1FO60840 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CACNA1FO60840 MYLKP1-201ENST00000509077 1580 ntBASIC23.52■■□□□ 1.36
CACNA1FO60840 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CACNA1FO60840 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.52■■□□□ 1.36
CACNA1FO60840 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CACNA1FO60840 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.52■■□□□ 1.36
CACNA1FO60840 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CACNA1FO60840 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CACNA1FO60840 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CACNA1FO60840 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.52■■□□□ 1.36
CACNA1FO60840 USF2-205ENST00000594064 1179 ntTSL 2 BASIC23.52■■□□□ 1.36
CACNA1FO60840 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
CACNA1FO60840 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CACNA1FO60840 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
CACNA1FO60840 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CACNA1FO60840 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.52■■□□□ 1.36
CACNA1FO60840 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.52■■□□□ 1.36
CACNA1FO60840 LINC01311-201ENST00000565162 1445 ntBASIC23.51■■□□□ 1.35
CACNA1FO60840 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC23.51■■□□□ 1.35
CACNA1FO60840 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CACNA1FO60840 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CACNA1FO60840 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CACNA1FO60840 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CACNA1FO60840 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CACNA1FO60840 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.51■■□□□ 1.35
CACNA1FO60840 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CACNA1FO60840 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CACNA1FO60840 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CACNA1FO60840 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.51■■□□□ 1.35
CACNA1FO60840 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CACNA1FO60840 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CACNA1FO60840 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CACNA1FO60840 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC23.51■■□□□ 1.35
CACNA1FO60840 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.51■■□□□ 1.35
CACNA1FO60840 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.5■■□□□ 1.35
CACNA1FO60840 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CACNA1FO60840 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CACNA1FO60840 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.5■■□□□ 1.35
CACNA1FO60840 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CACNA1FO60840 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.5■■□□□ 1.35
CACNA1FO60840 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CACNA1FO60840 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CACNA1FO60840 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CACNA1FO60840 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CACNA1FO60840 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CACNA1FO60840 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.5■■□□□ 1.35
CACNA1FO60840 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CACNA1FO60840 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CACNA1FO60840 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CACNA1FO60840 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms