Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LCMT2O60294 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LCMT2O60294 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LCMT2O60294 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.88■□□□□ 0.45
LCMT2O60294 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.88■□□□□ 0.45
LCMT2O60294 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.88■□□□□ 0.45
LCMT2O60294 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LCMT2O60294 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.88■□□□□ 0.45
LCMT2O60294 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 WWOX-216ENST00000569818 525 ntBASIC17.88■□□□□ 0.45
LCMT2O60294 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
LCMT2O60294 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.88■□□□□ 0.45
LCMT2O60294 AC005363.2-201ENST00000618631 242 ntBASIC17.88■□□□□ 0.45
LCMT2O60294 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
LCMT2O60294 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.88■□□□□ 0.45
LCMT2O60294 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LCMT2O60294 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LCMT2O60294 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LCMT2O60294 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.87■□□□□ 0.45
LCMT2O60294 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LCMT2O60294 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.87■□□□□ 0.45
LCMT2O60294 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LCMT2O60294 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
LCMT2O60294 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.87■□□□□ 0.45
LCMT2O60294 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LCMT2O60294 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.87■□□□□ 0.45
LCMT2O60294 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.87■□□□□ 0.45
LCMT2O60294 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.87■□□□□ 0.45
LCMT2O60294 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.87■□□□□ 0.45
LCMT2O60294 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.87■□□□□ 0.45
LCMT2O60294 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LCMT2O60294 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.87■□□□□ 0.45
LCMT2O60294 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.87■□□□□ 0.45
LCMT2O60294 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
LCMT2O60294 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LCMT2O60294 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LCMT2O60294 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCMT2O60294 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.87■□□□□ 0.45
LCMT2O60294 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LCMT2O60294 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.86■□□□□ 0.45
LCMT2O60294 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.86■□□□□ 0.45
LCMT2O60294 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 AC005521.1-201ENST00000393351 872 ntBASIC17.86■□□□□ 0.45
LCMT2O60294 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.86■□□□□ 0.45
LCMT2O60294 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.86■□□□□ 0.45
LCMT2O60294 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.86■□□□□ 0.45
LCMT2O60294 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.86■□□□□ 0.45
LCMT2O60294 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.86■□□□□ 0.45
LCMT2O60294 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.86■□□□□ 0.45
LCMT2O60294 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.86■□□□□ 0.45
LCMT2O60294 AL138966.2-201ENST00000621997 464 ntBASIC17.86■□□□□ 0.45
LCMT2O60294 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LCMT2O60294 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LCMT2O60294 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCMT2O60294 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LCMT2O60294 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LCMT2O60294 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LCMT2O60294 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.85■□□□□ 0.45
LCMT2O60294 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms