Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.72■□□□□ 0.59
LDB2O43679 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB2O43679 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB2O43679 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LDB2O43679 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LDB2O43679 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LDB2O43679 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LDB2O43679 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LDB2O43679 INGX-201ENST00000359239 846 ntBASIC18.71■□□□□ 0.59
LDB2O43679 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.71■□□□□ 0.59
LDB2O43679 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.71■□□□□ 0.59
LDB2O43679 AC116562.4-202ENST00000641738 218 ntBASIC18.71■□□□□ 0.59
LDB2O43679 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LDB2O43679 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB2O43679 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LDB2O43679 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LDB2O43679 AC090164.3-201ENST00000610780 2143 ntBASIC18.71■□□□□ 0.59
LDB2O43679 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB2O43679 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LDB2O43679 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LDB2O43679 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.58
LDB2O43679 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB2O43679 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.7■□□□□ 0.58
LDB2O43679 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LDB2O43679 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.7■□□□□ 0.58
LDB2O43679 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB2O43679 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.7■□□□□ 0.58
LDB2O43679 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LDB2O43679 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.7■□□□□ 0.58
LDB2O43679 AC073592.3-201ENST00000625118 1834 ntBASIC18.7■□□□□ 0.58
LDB2O43679 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB2O43679 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB2O43679 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB2O43679 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LDB2O43679 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.7■□□□□ 0.58
LDB2O43679 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LDB2O43679 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.7■□□□□ 0.58
LDB2O43679 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.7■□□□□ 0.58
LDB2O43679 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.7■□□□□ 0.58
LDB2O43679 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LDB2O43679 KRT18P41-201ENST00000518924 1277 ntBASIC18.7■□□□□ 0.58
LDB2O43679 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LDB2O43679 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.7■□□□□ 0.58
LDB2O43679 EGLN1P1-201ENST00000531623 762 ntBASIC18.7■□□□□ 0.58
LDB2O43679 AC073912.3-201ENST00000624414 853 ntBASIC18.7■□□□□ 0.58
LDB2O43679 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB2O43679 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB2O43679 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB2O43679 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.7■□□□□ 0.58
LDB2O43679 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LDB2O43679 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LDB2O43679 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
LDB2O43679 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
LDB2O43679 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.69■□□□□ 0.58
LDB2O43679 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.69■□□□□ 0.58
LDB2O43679 BX088651.1-201ENST00000540551 451 ntBASIC18.69■□□□□ 0.58
LDB2O43679 MIR3180-5-201ENST00000583743 153 ntBASIC18.69■□□□□ 0.58
LDB2O43679 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.69■□□□□ 0.58
LDB2O43679 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LDB2O43679 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.69■□□□□ 0.58
LDB2O43679 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
LDB2O43679 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.69■□□□□ 0.58
LDB2O43679 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LDB2O43679 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LDB2O43679 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB2O43679 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.68■□□□□ 0.58
LDB2O43679 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
LDB2O43679 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LDB2O43679 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LDB2O43679 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LDB2O43679 AC112777.1-201ENST00000540175 1423 ntBASIC18.68■□□□□ 0.58
LDB2O43679 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB2O43679 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.68■□□□□ 0.58
LDB2O43679 NAPSB-206ENST00000562112 1266 ntBASIC18.68■□□□□ 0.58
LDB2O43679 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.68■□□□□ 0.58
LDB2O43679 AC010653.2-201ENST00000623505 997 ntBASIC18.68■□□□□ 0.58
LDB2O43679 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LDB2O43679 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.68■□□□□ 0.58
LDB2O43679 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB2O43679 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
LDB2O43679 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LDB2O43679 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LDB2O43679 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms