Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD6O43541 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMAD6O43541 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SMAD6O43541 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SMAD6O43541 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMAD6O43541 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.91■□□□□ 0.62
SMAD6O43541 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.91■□□□□ 0.62
SMAD6O43541 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SMAD6O43541 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.91■□□□□ 0.62
SMAD6O43541 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 AC112907.2-201ENST00000448639 330 ntBASIC18.91■□□□□ 0.62
SMAD6O43541 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.91■□□□□ 0.62
SMAD6O43541 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.91■□□□□ 0.62
SMAD6O43541 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.91■□□□□ 0.62
SMAD6O43541 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.91■□□□□ 0.62
SMAD6O43541 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.91■□□□□ 0.62
SMAD6O43541 HYMAI.1-201ENST00000620949 238 ntBASIC18.91■□□□□ 0.62
SMAD6O43541 AC034236.2-201ENST00000606662 1610 ntBASIC18.91■□□□□ 0.62
SMAD6O43541 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
SMAD6O43541 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD6O43541 HOXB1-202ENST00000577092 1414 ntBASIC18.91■□□□□ 0.62
SMAD6O43541 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SMAD6O43541 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.9■□□□□ 0.62
SMAD6O43541 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.9■□□□□ 0.62
SMAD6O43541 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SMAD6O43541 AL671277.2-201ENST00000458060 996 ntBASIC18.9■□□□□ 0.62
SMAD6O43541 RASA4DP-201ENST00000460726 1199 ntBASIC18.9■□□□□ 0.62
SMAD6O43541 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.9■□□□□ 0.62
SMAD6O43541 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.9■□□□□ 0.62
SMAD6O43541 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.9■□□□□ 0.62
SMAD6O43541 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
SMAD6O43541 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD6O43541 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.89■□□□□ 0.62
SMAD6O43541 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.89■□□□□ 0.62
SMAD6O43541 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMAD6O43541 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMAD6O43541 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD6O43541 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD6O43541 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.89■□□□□ 0.61
SMAD6O43541 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD6O43541 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD6O43541 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.89■□□□□ 0.61
SMAD6O43541 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD6O43541 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD6O43541 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD6O43541 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.89■□□□□ 0.61
SMAD6O43541 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.89■□□□□ 0.61
SMAD6O43541 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD6O43541 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SMAD6O43541 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
SMAD6O43541 AL157888.1-201ENST00000631930 593 ntBASIC18.89■□□□□ 0.61
SMAD6O43541 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SMAD6O43541 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.89■□□□□ 0.61
SMAD6O43541 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.89■□□□□ 0.61
SMAD6O43541 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD6O43541 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SMAD6O43541 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD6O43541 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD6O43541 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMAD6O43541 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
SMAD6O43541 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMAD6O43541 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMAD6O43541 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMAD6O43541 AC092597.1-201ENST00000487352 616 ntBASIC18.88■□□□□ 0.61
SMAD6O43541 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.88■□□□□ 0.61
SMAD6O43541 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms