Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC12.82□□□□□ -0.36
NDUFA1O15239 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NDUFA1O15239 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NDUFA1O15239 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 AC139713.2-201ENST00000641328 2723 ntBASIC12.82□□□□□ -0.36
NDUFA1O15239 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 SLC29A4P1-201ENST00000398760 971 ntBASIC12.82□□□□□ -0.36
NDUFA1O15239 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NDUFA1O15239 AC006970.2-201ENST00000450065 779 ntBASIC12.82□□□□□ -0.36
NDUFA1O15239 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.82□□□□□ -0.36
NDUFA1O15239 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC12.82□□□□□ -0.36
NDUFA1O15239 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 AL121906.2-201ENST00000621597 723 ntBASIC12.82□□□□□ -0.36
NDUFA1O15239 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
NDUFA1O15239 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NDUFA1O15239 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
NDUFA1O15239 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
NDUFA1O15239 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NDUFA1O15239 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NDUFA1O15239 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NDUFA1O15239 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.81□□□□□ -0.36
NDUFA1O15239 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.81□□□□□ -0.36
NDUFA1O15239 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.81□□□□□ -0.36
NDUFA1O15239 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.81□□□□□ -0.36
NDUFA1O15239 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.81□□□□□ -0.36
NDUFA1O15239 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC12.81□□□□□ -0.36
NDUFA1O15239 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.81□□□□□ -0.36
NDUFA1O15239 OAS3-207ENST00000551007 998 ntTSL 2 BASIC12.81□□□□□ -0.36
NDUFA1O15239 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC12.81□□□□□ -0.36
NDUFA1O15239 LINC00896-202ENST00000609602 2128 ntBASIC12.81□□□□□ -0.36
NDUFA1O15239 AL121832.2-201ENST00000610979 668 ntBASIC12.81□□□□□ -0.36
NDUFA1O15239 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC12.81□□□□□ -0.36
NDUFA1O15239 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NDUFA1O15239 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NDUFA1O15239 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NDUFA1O15239 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.81□□□□□ -0.36
NDUFA1O15239 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.81□□□□□ -0.36
NDUFA1O15239 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.81□□□□□ -0.36
NDUFA1O15239 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC12.81□□□□□ -0.36
NDUFA1O15239 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFA1O15239 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFA1O15239 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFA1O15239 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
NDUFA1O15239 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
NDUFA1O15239 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFA1O15239 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFA1O15239 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.8□□□□□ -0.36
NDUFA1O15239 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFA1O15239 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NDUFA1O15239 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFA1O15239 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFA1O15239 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
NDUFA1O15239 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFA1O15239 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFA1O15239 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFA1O15239 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
NDUFA1O15239 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFA1O15239 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFA1O15239 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
NDUFA1O15239 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NDUFA1O15239 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms