Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM38O00635 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM38O00635 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM38O00635 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM38O00635 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM38O00635 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TRIM38O00635 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM38O00635 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM38O00635 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM38O00635 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRIM38O00635 AC007613.1-201ENST00000572811 2597 ntBASIC18.83■□□□□ 0.6
TRIM38O00635 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
TRIM38O00635 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM38O00635 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM38O00635 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRIM38O00635 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM38O00635 AC092647.4-201ENST00000457211 535 ntBASIC18.82■□□□□ 0.6
TRIM38O00635 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM38O00635 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM38O00635 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM38O00635 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM38O00635 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM38O00635 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM38O00635 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM38O00635 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM38O00635 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
TRIM38O00635 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TRIM38O00635 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM38O00635 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
TRIM38O00635 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.81■□□□□ 0.6
TRIM38O00635 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.81■□□□□ 0.6
TRIM38O00635 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.81■□□□□ 0.6
TRIM38O00635 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM38O00635 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM38O00635 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM38O00635 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
TRIM38O00635 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
TRIM38O00635 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM38O00635 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM38O00635 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM38O00635 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM38O00635 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM38O00635 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM38O00635 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM38O00635 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM38O00635 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM38O00635 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.8■□□□□ 0.6
TRIM38O00635 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM38O00635 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM38O00635 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM38O00635 AL049812.1-201ENST00000432563 2267 ntBASIC18.8■□□□□ 0.6
TRIM38O00635 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM38O00635 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM38O00635 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM38O00635 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM38O00635 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM38O00635 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM38O00635 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM38O00635 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
TRIM38O00635 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
TRIM38O00635 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM38O00635 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM38O00635 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM38O00635 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM38O00635 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM38O00635 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM38O00635 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM38O00635 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM38O00635 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms