Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV8-2A0A0B4J237 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRAV8-2A0A0B4J237 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV8-2A0A0B4J237 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-2A0A0B4J237 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-2A0A0B4J237 AC135050.7-201ENST00000624508 2218 ntBASIC14.25□□□□□ -0.13
TRAV8-2A0A0B4J237 AC007613.1-201ENST00000572811 2597 ntBASIC14.25□□□□□ -0.13
TRAV8-2A0A0B4J237 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-2A0A0B4J237 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV8-2A0A0B4J237 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
TRAV8-2A0A0B4J237 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 NIFKP9-201ENST00000419265 221 ntBASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 AC131212.4-201ENST00000623606 975 ntBASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 RCC2P6-201ENST00000526625 1557 ntBASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-2A0A0B4J237 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 HEIH-201ENST00000623091 1652 ntBASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 RPS2P4-201ENST00000476944 856 ntBASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV8-2A0A0B4J237 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-2A0A0B4J237 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-2A0A0B4J237 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRAV8-2A0A0B4J237 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms