Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC187A0A096LP49 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 AC079781.3-201ENST00000449110 356 ntBASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 MIR3180-4-201ENST00000582223 153 ntBASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 Z69720.1-201ENST00000601483 472 ntBASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 GPR32P1-201ENST00000601788 811 ntBASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 AC138894.3-201ENST00000603787 634 ntBASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC187A0A096LP49 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC187A0A096LP49 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 AC233702.3-201ENST00000578656 1387 ntBASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 AC034236.2-201ENST00000606662 1610 ntBASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 AL022342.1-201ENST00000400363 863 ntBASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 AL662844.1-201ENST00000546340 181 ntBASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC187A0A096LP49 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC187A0A096LP49 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms