Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 HMGA1P5-201ENST00000412453 271 ntBASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 AK4P3-201ENST00000418260 669 ntBASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 AC087388.1-201ENST00000571370 1112 ntBASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 AC116562.4-202ENST00000641738 218 ntBASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HRH3Q9Y5N1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 AC139887.4-201ENST00000607877 719 ntBASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HRH3Q9Y5N1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 SLC25A1P2-201ENST00000430693 912 ntBASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 AC063952.2-201ENST00000498792 1227 ntBASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HRH3Q9Y5N1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 FEM1AP3-201ENST00000403722 1741 ntBASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.27■□□□□ 0.36
HRH3Q9Y5N1 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms