Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 AC005082.1-201ENST00000413042 2259 ntBASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 NEK4P2-201ENST00000580004 1012 ntBASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 AL023973.1-201ENST00000624619 620 ntBASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 NEFHP1-201ENST00000412845 2629 ntBASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 IER3-202ENST00000376377 1350 ntBASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 KRT8P45-201ENST00000414328 1447 ntBASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA3Q9Y5H0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 KRT8P11-201ENST00000409686 1436 ntBASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 AC093503.3-201ENST00000624917 2352 ntBASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGA3Q9Y5H0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms