Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB13Q9Y5F0 AL109659.2-201ENST00000606809 1674 ntBASIC20.69■□□□□ 0.9
PCDHB13Q9Y5F0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB13Q9Y5F0 Z98044.1-201ENST00000632503 1764 ntBASIC20.69■□□□□ 0.9
PCDHB13Q9Y5F0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB13Q9Y5F0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB13Q9Y5F0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB13Q9Y5F0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB13Q9Y5F0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 AL031598.1-201ENST00000561511 1773 ntBASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 RN7SL832P-201ENST00000607781 1756 ntBASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 AC007663.1-201ENST00000438948 1240 ntBASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 MTND4LP12-201ENST00000448237 295 ntBASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 AP003041.3-201ENST00000527151 707 ntBASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 AC010653.2-201ENST00000623505 997 ntBASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 AP003400.6-201ENST00000624698 740 ntBASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB13Q9Y5F0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 GPAT2P1-201ENST00000444924 1672 ntBASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHB13Q9Y5F0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 MCCD1P1-208ENST00000445732 328 ntBASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB13Q9Y5F0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB13Q9Y5F0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms