Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4E1Q9UPM8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 KRT8P9-201ENST00000558927 1449 ntBASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 MCCD1P1-208ENST00000445732 328 ntBASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 MIR4674-201ENST00000582457 87 ntBASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4E1Q9UPM8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 CCR12P-201ENST00000446203 998 ntBASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 AP003041.3-201ENST00000527151 707 ntBASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
AP4E1Q9UPM8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 CYP2D8P-201ENST00000433633 1490 ntBASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 MMP23A-201ENST00000234610 1017 ntBASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 TSPY17P-201ENST00000450329 467 ntBASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 AL353719.1-201ENST00000566847 864 ntBASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 AC092338.2-201ENST00000568827 1415 ntBASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4E1Q9UPM8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms